SimpleSearch - Line and FST details


Line specific information

 
Line ID 180C10
Vector Used pAC161
Line Availability available as T3 set from NASC (N417218)
Segregation Analysis 50:47:35
Confirmed for Hit At3g53680
Parent of DUPLO pair 2624
Parent of pair(s) none

Gene hit At3g53680

 
Sequence (A. th genome BLAST matches underlined) 
>75-K013611-022-180-C10-8409
NTTTGATCCATGGTAGATTTCCCGGACATGAAGACCTTTACAATTGAATATATCCTGCCG
CCGCTACAGATTGACACCCGGTGAATGTTCATTGGAACACTCACCGCCTATATTACATCG
AGTTGCTTGTAATCACAAAGGTGATTTGCCCTGAGACAACCGACCTGGTACTCTTTATTG
CACTTGGAGAGCAAAGAGGAAAAATGACCAGTTTACAACAACGACGTGGGAAAAGAAATT
TTGGACTAGATACCATAATCAGCGATGCCTGGTCACAGAGAATAACTGTCCTATCATCGA
ATTTCCCAATGCTAAAATCATGCAACCTATCAGAGATGGGGGATAATGAATAATCAGAGT
GGAGTACAAGTATATTCGCATTCAAATTAAAATAGGTATACAACCAACCTGCAGAACACG
CAACCACCAATTTCGCTGTCTGGTGCTTTAACCACTCTTGTCAGTCTTATAGCTATGGGT
TTTAAATTGGGATCGCTATGGGATCCTCC
GenBank Accession AL771448 [GenBank]
Graphic View Graphic view of gene At3g53680
Predicted Position of Insertion Chr3:19894208 - go to primer design
BLAST e Value 3e-131
Hit Clone Code (BAC ID) F4P12
Hit Gene Code At3g53680 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL771448 [GenBank]


Last Updated on 10.06.2021 13:37