SimpleSearch - Line and FST details
Line specific information
Line ID | 220D11 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N421071) |
Segregation Analysis | 100:74:55 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At1g22140
Sequence (A. th genome BLAST matches underlined) | >84-K014205-022-220-D11-8409 NTTTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATTCACGTA AACTCATATAAAGTTATCAAACTGATAAAAGTTAGCGTCTTTGATGCTGAAACAGCATAT GAGTATCTCGTAATCTCATCACCGCTTATCCAGAGAGATTTTGATGAAAAAAGAAGAGCA AACTTAAGAAATCTCCAAAACGATATACAACGAAACGAGGCATATGGGATCCTGCCTATA GCGAGAGACAAAAGTGGGAACATGAGAGTACAACAACAAAAGAGAAACAGAGTTGGATCA CAAATCATCGAGGAAATGTCTTAAATCACCTGAAACACACATAAATAGACAACATCAATA GATAATGCAGTAACAGATCTCTTTAGCTATGGGATCCTCCCTATAGTGAG |
GenBank Accession | AL767587 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr1:7814667 - go to primer design |
BLAST e Value | 2e-76 |
Hit Clone Code (BAC ID) | F2E2 |
Hit Gene Code | At1g22140 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | zinc finger CCCH domain protein |
Insertion Classification | TS2TE (3') |
Confirmation Status | unknown |
Gene hit At2g07717
Sequence (A. th genome BLAST matches underlined) | >84-K014203-022-220-D11-8409 NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATTCACTAAAC TCATAAAAGTTATCAAACTCATAAAAGTTAGCGTCTTTGATGCTTAAACAGCATATGAGT ATCTCGTAATCTCATCACCGTTTATCCAAAGATTTTGATGAAAAAAGAAGAGCAAACTTA AGAAATCTCCAAAACGATATACAACGAAACGAGGCTATGGGATCCGTCCTATACGGGGGC TACCCCTGCGGATTTACATAAATCCTCCACAGCGGCGAAGGTAGATGCATGAGTTACAGC TGGAGTGATGACATGCTTAAAGATTGAGTCAGCTGCTTTCGCACGCCCATAGTCTAATAT GCCAATCACCTATGGGATCCTTCCTATGGTGAGGGAGAGCANCTTGTTGGGTTAAAAACT TTTTTTGTTGCTAAATGTTACAGCCTAGATGCTGAACTATTGACTCTACTCGTTCGGATG GGTGTTCACCCCAAAGTGTTCCCGGACTGCATGCATACATCCGTAAGTAACTTACTGCAA CATGGCAAATCTCATTGAGAGGAATCAGCAAAGAAAAGAAACACGGGTCAACATCTTAAT GTGTATTTGAGGATATTTTAGGGCCCTA |
GenBank Accession | AL767586 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr2:3425643 - go to primer design |
BLAST e Value | 3e-103 |
Hit Clone Code (BAC ID) | T18C6 |
Hit Gene Code | At2g07717 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | |
Insertion Classification | CDSi |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |