SimpleSearch - Line and FST details


Line specific information

 
Line ID 227C05
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At4g31710

 
Sequence (A. th genome BLAST matches underlined) 
>35-K014266-022-227-C05-8409
CTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATGTAAAAAAAAAAC
TTCTTCGAACCAACACCTTTTGGCGTTAAATCTTATCCATTTATAAATATGAGTTCAAAA
TATTTTCAAGATGTATACATTCCACGGTACTTAACCAAAACCAAAAACAAAAGAAAAATG
AAGAGACATCTCAACGACGTCGTCTTAGTGTTTCTCGTTTTTATCTTCGGCGTGAAATTG
GGGAAGGGACAGAATACGACAATCCAAGTAATTAATGTTGGGGTTGTGACTGATGTTGGG
ACAACTGCCTCCAACTTGAGCTTGCTCGCCATTAACATGTCTCTCTCAGACTTTTACTCT
TCTCGTCCAGAATCTCGGACCAGGCTTCTTCTTAACTTTGCCGACCCTATGGGATCCTCC
CTGGGGGGAG
GenBank Accession AL761650 [GenBank]
Graphic View Graphic view of gene At4g31710
Predicted Position of Insertion Chr4:15349070 - go to primer design
BLAST e Value 9e-153
Hit Clone Code (BAC ID) F28M20
Hit Gene Code At4g31710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glutamate receptor 2.4
Insertion Classification 5' region
Confirmation Status unknown

Gene hit F2A19

 
Sequence (A. th genome BLAST matches underlined) 
>35-K014262-022-227-C05-8409
CTGATCCATGTAGATTTCCCGGACATGAAGCACCTGTACACTCTCGAATGCCCGACACAT
ACTCGATCCAGGCCGACCTCTTTGTCGGCGCTCTAAGTGTTTTTACCTTATGAGCATTGC
GATCCATAGGATATACCATATGACTTCGGATCACGGTACTTACCTCAATACCAGCATCTA
CCGAATTATGCTATGACGTCTTAACCACGATAGCGACGCGCTGCCTGATCTAATCATTTG
CGGGAGATGGGCGAAGGCACATACCACAACGCTCTGTGGTCTTAGGGATGGGGGGGTGAC
CGCGGATGCGACACTAGGCGACAATTCGTACTGGCTAACGATAAACGTGTCCATCGCAGA
CTATTACATTTAAAATGCCATAATCTCTTACACAAGCTCATGTATATGTACCGCGACAAT
ATGGGCGCCTGCATGNGGGGAAGTATTACTGCAGATAGGTAAAGGTGTAACTGTGAAAAA
ACTTTCAAATCTAGCTATGGGATCCT
GenBank Accession AL761649 [GenBank]
Graphic View Graphic view of sequence AL761649 of line 227C05
Predicted Position of Insertion Chr3:22790439 - go to primer design
BLAST e Value 5e-25
Hit Clone Code (BAC ID) F2A19
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37