SimpleSearch - Line and FST details


Line specific information

 
Line ID 296A04
Vector Used pAC161
Line Availability line died - no seeds available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g49210

 
Sequence (A. th genome BLAST matches underlined) 
>25-K015552-022-296-A04-8409
TTTTTACGGCTGAGAGATAAATGAAGGAATTGTTTTTGTTGTTGATCAAACAGTGAATAT
TTTATTCTACTCGATCCAAACCAATAAAACTAAACATTCTACATCAAATATGTAAACCGA
ATATATACCGAATAAATAGGCTGTAATCAGAATCATAAAATTGTCAGTTATTCAGCCGAT
TAATTACTACATGGGCTTTAATCAGAATATTTCCTTGTTCTTGATCCATTTTTGTTGAAT
GAGTTATTATTTCACTGTCTCAAGGTTTAAAAGAAGTTAGACAAGGGATTAATTACTACT
TTGGCCTTCACTACTAAAAGGTTTACATCATGTGGAACATATGATATTGACCCTATGGGA
TCCTCATAANGTTGGAGTATGGGATCCTC
GenBank Accession AL946366 [GenBank]
Graphic View Graphic view of gene At5g49210
Predicted Position of Insertion Chr5:19949812 - go to primer design
BLAST e Value 9e-147
Hit Clone Code (BAC ID) K21P3
Hit Gene Code At5g49210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation stress response NST1-like protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At2g40690

 
Sequence (A. th genome BLAST matches underlined) 
>25-K015495-022-296-A04-8409
NTTTTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGTT
CGGACGTACTCAGTTCATGATCCTTGACCATTTATATATTTTCCCAAAAAAAAAGAAACG
ACCAACCGACCCTTTCCAAACCTCAATCGTTGAACCCTAATCCCAAAACAATTCAATGCA
AATGGACTTTGTTAATGAGATGTGGACATCTTTCTTAAGGCTGAGGACGTATACGGTGAC
GTATAGGATGCATAGCCCTTGCAATTGCAGTGTCCTTGTCGTTGAGTAATCGAAGACGGA
GGGAAAGAAACAGAGAACTTGTTTGGTTCGTCGAAGAATAAGATGATGAATAGAGCCCTA
CTTTGGGCTTGAGAAACAAAGCGTGAAGCTAATGATGCTCTGGGATCCT
GenBank Accession FR807358 [GenBank]
Graphic View Graphic view of gene At2g40690
Predicted Position of Insertion Chr2:16976496 - go to primer design
BLAST e Value 1e-50
Hit Clone Code (BAC ID) T7D17
Hit Gene Code At2g40690 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD-dependent glycerol-3-phosphate dehydrogenase family protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37