SimpleSearch - Line and FST details


Line specific information

 
Line ID 393A08
Vector Used pAC161
Line Availability available as T3 set from NASC (N437640)
Segregation Analysis 50:49:49
Confirmed for Hit At5g43830
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g43830

 
Sequence (A. th genome BLAST matches underlined) 
>57-K018292-022-393-A08-8409
TTTCCCGGACATGAAGCCTCTACTTGGCTTATCAAAGTTTAAATCAGATAATTGTGATTC
CGTTGAAAGATATGGATTATCCATCTAATTAACTCTTTTTTATTAACCTCATTGAGAAAA
AAGAAAAATATCCAAAACTTTCTTATCCTCTTGAATCACGACACGTGTCAATAACGTAGG
GGTAAAATAGTAATCACGTATATCCTACAAGATTCCTTTATAGCCTTCCCGGTCTTTCTT
CACTTTTTTCCTCATCATTTTCTCGTTTGCTCCATTTTTTTCTTCTTTCTGCAAATTTTA
TTTTCCCGAGAAAATCATCACTGAGAAAAATGCTCGCTGTGTTTGAGAAGACGGTGGCGA
ATAGCCCTGAAGCTTTACAGAGTCCACACTCGTCTGAGTCTGCTTTCGCGTTGAAAGATG
GATCTCTCGCTACTCATTTCGCTTCCGTGAATCCCAACTCCGTCACGCTTAACTTCGGAT
CTTCTGGATTTGTTGCTTACTCTCTTGATAATCCTGATCCTCGTGTTCCTATGGAT
GenBank Accession BX286689 [GenBank]
Graphic View Graphic view of gene At5g43830
Predicted Position of Insertion Chr5:17624520 - go to primer design
BLAST e Value 1e-124
Hit Clone Code (BAC ID) MQD19
Hit Gene Code At5g43830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation aluminum induced protein with YGL and LRDR motifs
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37