SimpleSearch - Line and FST details


Line specific information

 
Line ID 397G01
Vector Used pAC161
Line Availability available as T3 set from NASC (N438089)
Segregation Analysis 50:49:42
Confirmed for Hit At5g51710
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g51710

 
Sequence (A. th genome BLAST matches underlined) 
>07-K017891-022-397-G01-8409
TGATCTGAAATTTCCCGGACATGAAGCCATTTACATTGAATATTACCGAAACAATCAGAC
ATATAAGGCTAATATCGTTACAGACGCTTCTACACCAAGTAAAACAAGCTATAAGCGCTT
GAACTACGCAAAAGGTAGTGAATAGTAAATATATACGATATTACAAAAAATAAAGAGTTA
AGAAAATACAAAAAGCAAGTCTTGGATCTGATTTGGTCAGTTTCAAATGTTTTTTCTGCC
TCCTATGGGATCTCGCCTATAGTGAGAGGNNAANNNNNAANNNNNNTNCCCCTTTTTTTT
TTCTTTGAAAAATGAAGATGCCCGCTGCGTTCTTAAAGGTGAATGAGATTATAAAAACAC
GACAATTACCCCTCCTTCTATTTTAAGGCAAAAACAAAAAAAAATTATTCTAATTCGGAA
ATCTTTATTTGGACGGGTCTACTTTCACTTCCAAGTGGGGGCTTAAAAAGAGAAATTTCG
CAATCGATGCCTTGATTTCCCCATTCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNN
GenBank Accession BX287164 [GenBank]
Graphic View Graphic view of gene At5g51710
Predicted Position of Insertion Chr5:21004315 - go to primer design
BLAST e Value 4e-78
Hit Clone Code (BAC ID) K10D11
Hit Gene Code At5g51710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation K efflux antiporter 5
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Other FSTs Supporting this Hit BX287165 [GenBank]


Last Updated on 10.06.2021 13:37