SimpleSearch - Line and FST details


Line specific information

 
Line ID 437E11
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit K21P3

 
Sequence (A. th genome BLAST matches underlined) 
>85-K018192-022-437-E11-8409
GTTAAAGAGTTGCAGAAACTAAACAACAGATGACAGGATGCAGTAAACAGCAGTAAAGTA
AACAATAAAATCAATCAGACAAAGAATTCCTAAGGATGGGGTAATTGAGTAGTTTCGTTT
CCTCAGTTTACAGGTGATTGACATGCTCAATAAATTAACCCTATAGGACCGTCCATTCGC
CGAGATCTAAGTGCCACCGCAACAGAGATTCTCAAGCTAACCTATGGGATCCCCNTTATN
GTGAGACTCTCTTGCNGCCGTGACATGACGCANTTTCTGTTTCAACTGGCTCACGATCAT
AGGTAATACTCTTTGATGATCTTCTGTCACTATTTCAAACATATCTCCACCATATAACAT
TTCTACACATTTGTAGGACTTCTCTCCAAGATCTTTTGGTTTCATCTCTCCCTTAATAAC
TTCTTATGCACTCTCCACTACACTTGTTAGAGCTCCCATCAATATATCTACCTCGGACGT
CTGATCTTCGCATTTGTACATATCTTCCTCGATAGCGGTTAGATTTTTATGTCCCTATGG
GAT
GenBank Accession BX290546 [GenBank]
Graphic View Graphic view of sequence BX290546 of line 437E11
Predicted Position of Insertion Chr5:19952747 - go to primer design
BLAST e Value 5e-148
Hit Clone Code (BAC ID) K21P3
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g20750

 
Sequence (A. th genome BLAST matches underlined) 
>85-K018182-022-437-E11-8409
ACATGACAAATCCATCTTAATGGTGAAAAAGAGACGTTTAAATATTCAGAAAGCGGTTAA
AATGTTCTGGAAGACCCACCATGGAGATGAGACAGTGAGAAGACTGAGAGGGACATTAGA
ACGTGACAACAAGAGAATCTTTTTCCTTCAATATTTTTTTTAAACACTTTTCTTTTGTAG
GGAATTTGATAATATGAAATGGATAGATTTTACTGCTTAATTTTTAATCATTTTTTATCA
GAAACTTTTTCGTTTTAAATCTACGGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX290545 [GenBank]
Graphic View Graphic view of gene At3g20750
Predicted Position of Insertion Chr3:7254628 - go to primer design
BLAST e Value 2e-45
Hit Clone Code (BAC ID) MOE17
Hit Gene Code At3g20750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GATA transcription factor 29
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37