SimpleSearch - Line and FST details


Line specific information

 
Line ID 486C09
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g53050

 
Sequence (A. th genome BLAST matches underlined) 
>67-K019564-022-486-C09-8409
GAGCATTTTTACATTGATATATCCTGCCTTCGGTTGCTATTGTCGGGCATATGAATTCCA
TTGACGTAGTACTACTTCTACTCCTATGGGATCTNCCGTATAGTGAGAGAACNATGGGAT
CCTCCCTATAGTGAGANNNNNNNNNCCAAACGGCATGCGCCCCCCCCGATATAAAAAAAC
CCTTTCCTCTCTTCACATGAGACCAGCAAACCCCCTTCACTTCGCCCCACTCCGTTTCAC
CCGCGCGAAATTCTTTCTCCTGATCCATTATCCCTTGGTATCCCCCCTTCCTCCTTACTC
CCTTCAATAGTCTTCAACGATAAAAAGCACAACACCTCCGGTTTCTTTTCTTTATAAATG
GenBank Accession BX532045 [GenBank]
Graphic View Graphic view of gene At5g53050
Predicted Position of Insertion Chr5:21513761 - go to primer design
BLAST e Value 3e-11
Hit Clone Code (BAC ID) MNB8
Hit Gene Code At5g53050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha/beta-Hydrolases superfamily protein
Insertion Classification Promoter
Confirmation Status unknown

Gene hit T10P11

 
Sequence (A. th genome BLAST matches underlined) 
>67-K026178-022-486-C09-8409
GNAGCCATTTACAATTGAGTATATCCTGACACCGTGATACGCTTAGCTCGAGGGCGGAAC
TTGACTCTCGGATCCAAGGCATAAGTGATACACCCTATATAAGATGTTATTTTTTTTAAC
CTTAAAATGGAGTATGGTCTACCTAAGATTTGAAATAGATATTATTACCGAAAGGCTTCA
ATTATCCCTTTTTTCTTATGAGAAAAAACGAAAGACTTGCACTTCTCGTGGTGTCTTTCG
CGACATTACACACATGACACATCCCTTGGCATTTTCGTTATAAATTATTACATGATCCAC
AGTTCCTGTGTTCCCTCTACAATCACTCACATGAACATGTGAACTGTAACCACAAAAATG
TATGGGATCCTCCCTATAGTGAGACTATAANCTCACTATAGGGAGGATCCCATACTTTTT
TTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAACCTCACTATAGGGAGGATCCC
ATACTGGGACTATATTCATGACCAACTGGAAGCTAGA
GenBank Accession CR397630 [GenBank]
Graphic View Graphic view of sequence CR397630 of line 486C09
Predicted Position of Insertion Chr4:1187927 - go to primer design
BLAST e Value 3e-105
Hit Clone Code (BAC ID) T10P11
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit CR397631 [GenBank]


Last Updated on 10.06.2021 13:37