SimpleSearch - Line and FST details
Line specific information
| Line ID | 674H12 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
| Note |
Gene hit At1g07380
| Sequence (A. th genome BLAST matches underlined) | >96-K024534-022-674-H12-8409 TAGTGTAATGTGTTGCAGCAATGCGTTGCCGCCATACCGGAGACGCCTTCCAGCCATAGT TGTAAATTCTGACGAGAAAGATAGACCGGATTATTAAACATCGCATCACTATGGGATCCT CCCTATAGTGAGAATCCANTGTAACCCCCTCTCCCCCGACTGTCGCCAACTGCAGGAGGG GGGGGGGGGGGGGCTGATCATCCAACTATAACATCCTTTCTACCCAACGCCGAGCCACGC CTCCGCCCCCCTCATTAACATATCCCTCAGATTCCCTATACTTACATCGCCACCAGACCC ATAAATATCAAAGGCCCATAAACTCAAACTTTCACCGATGATGACCCTACCCTACAGCAC CGACGGTGAGACAAACCCGAGTCAGTGCGCGACCCGCCAGAACGCAGCGGCCTCATCCAC ATAAATGGGGACGACATCAATCCCATC |
| GenBank Accession | BX943553 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:2265963 - go to primer design |
| BLAST e Value | 5e-30 |
| Hit Clone Code (BAC ID) | F22G5 |
| Hit Gene Code | At1g07380 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Neutral/alkaline non-lysosomal ceramidase |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
Gene hit At1g68450
| Sequence (A. th genome BLAST matches underlined) | >96-K025929-022-674-H12-8409 AGCCATTTACAATTGAATAATCCTGAGAGACGAGACGGAGGGATGCTCGCGAGAGTGTGA TGACAGGGTGGGGGAACAGCTCGAGACCGAGACGTATATGAGTTCCAATGATAACTGAGC CATGTGCACCTTCCCCCCAACACGGTGAGCGACGGGGCAACGGAGTGATCCACATGGGAC TTTTAAACATCATCCGTCGGATGGCGTTGCGAGAGAAACAGTCGATCCGTGAGATCAGCC GACGCACCGGGCAGGCGCGCAACACGATCGCAAAGTATTTGAACGCAAGTATGGGATCCT CCCTATAGTGAGACCTATTACTCTCCCCGTTTGGCTGCATATGGTTGAAATGGATTTACT TCTCTCCTTTTACGTAATAAAAAATTTATGAAAATGTTCAAAACTATCGGCTTTTAAAAG TAGAAAATAAATAATTAAACCTACTTACAGGCANCTGAAACCATTAATCTATTTGTTATC CCCAAATTGCTGGATATTATAAATTATATCATGGACATTGTTTT |
| GenBank Accession | CR398261 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:25662359 - go to primer design |
| BLAST e Value | 1e-36 |
| Hit Clone Code (BAC ID) | T2E12 |
| Hit Gene Code | At1g68450 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | VQ motif-containing protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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