SimpleSearch - Line and FST details


Line specific information

 
Line ID 674H12
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At1g07380

 
Sequence (A. th genome BLAST matches underlined)
>96-K024534-022-674-H12-8409
TAGTGTAATGTGTTGCAGCAATGCGTTGCCGCCATACCGGAGACGCCTTCCAGCCATAGT
TGTAAATTCTGACGAGAAAGATAGACCGGATTATTAAACATCGCATCACTATGGGATCCT
CCCTATAGTGAGAATCCANTGTAACCCCCTCTCCCCCGACTGTCGCCAACTGCAGGAGGG
GGGGGGGGGGGGGCTGATCATCCAACTATAACATCCTTTCTACCCAACGCCGAGCCACGC
CTCCGCCCCCCTCATTAACATATCCCTCAGATTCCCTATACTTACATCGCCACCAGACCC
ATAAATATCAAAGGCCCATAAACTCAAACTTTCACCGATGATGACCCTACCCTACAGCAC
CGACGGTGAGACAAACCCGAGTCAGTGCGCGACCCGCCAGAACGCAGCGGCCTCATCCAC
ATAAATGGGGACGACATCAATCCCATC
GenBank Accession BX943553 [GenBank]
Graphic View Graphic view of gene At1g07380
Predicted Position of Insertion Chr1:2265963 - go to primer design
BLAST e Value 5e-30
Hit Clone Code (BAC ID) F22G5
Hit Gene Code At1g07380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Neutral/alkaline non-lysosomal ceramidase
Insertion Classification CDSi
Confirmation Status failed

Gene hit At1g68450

 
Sequence (A. th genome BLAST matches underlined)
>96-K025929-022-674-H12-8409
AGCCATTTACAATTGAATAATCCTGAGAGACGAGACGGAGGGATGCTCGCGAGAGTGTGA
TGACAGGGTGGGGGAACAGCTCGAGACCGAGACGTATATGAGTTCCAATGATAACTGAGC
CATGTGCACCTTCCCCCCAACACGGTGAGCGACGGGGCAACGGAGTGATCCACATGGGAC
TTTTAAACATCATCCGTCGGATGGCGTTGCGAGAGAAACAGTCGATCCGTGAGATCAGCC
GACGCACCGGGCAGGCGCGCAACACGATCGCAAAGTATTTGAACGCAAGTATGGGATCCT
CCCTATAGTGAGACCTATTACTCTCCCCGTTTGGCTGCATATGGTTGAAATGGATTTACT
TCTCTCCTTTTACGTAATAAAAAATTTATGAAAATGTTCAAAACTATCGGCTTTTAAAAG
TAGAAAATAAATAATTAAACCTACTTACAGGCANCTGAAACCATTAATCTATTTGTTATC
CCCAAATTGCTGGATATTATAAATTATATCATGGACATTGTTTT
GenBank Accession CR398261 [GenBank]
Graphic View Graphic view of gene At1g68450
Predicted Position of Insertion Chr1:25662359 - go to primer design
BLAST e Value 1e-36
Hit Clone Code (BAC ID) T2E12
Hit Gene Code At1g68450 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation VQ motif-containing protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37