SimpleSearch - Line and FST details


Line specific information

 
Line ID 875F05
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit T15N1

 
Sequence (A. th genome BLAST matches underlined) 
>38-K026521-022-875-F05-8409
CGGACAGNAGCCATTTACATTGAATATATCCTGTAGCCCGTGCTGCTTAGCCACAGGGAG
AGCATAGGAGCATCGTTCCGCAGCACAACTGATACTGATCAATACTGACATGACATCAAA
CAACGAATTAAGTCGAGTCTGTGCCTGTGATCACTTAGCGATTTCCTAACTGAGATTTCC
TTTTCTGACTTTTCAACATTACCCGATTTATGAAATACCGAAAAAGTGAATAACTACAAT
CTGTGTATGGAATCCTCCCTATAGTGAGCAACACGATCGCAAAGTATTTGAACGCAGGTA
TGGGATCCTCCCTATAGTGAG
GenBank Accession CR405099 [GenBank]
Graphic View Graphic view of sequence CR405099 of line 875F05
Predicted Position of Insertion Chr5:4722753 - go to primer design
BLAST e Value 4e-15
Hit Clone Code (BAC ID) T15N1
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At2g12480

 
Sequence (A. th genome BLAST matches underlined) 
>38-K026467-022-875-F05-8409
TTACATTGAATATATAGAGAGGACTCTGCATGTGAGAATATAAGTTTAGTTTGCCCGAAC
ATATTTGAATTTAAATTTTTCTTGTCCGAGTAGAAAATAATTGCCACTTGGGATTTTAGA
TAGGCATCTCCAGTTGTAAATTAGTGGTTACGACATTAGAGTGAATTTCGTATGGGATCC
TCCCTATAGTGAGATAGACATACCGCAGAAGTGAAGAACGATAATCTGCGTATGGCATCC
TCCCTATACCGCGCACCGTTGCAAAGGTCAATATATTCCCATACTCTGTGACCCAGCCAC
CAACCTTAGTTACAATCCCAACATCCACAAGTTAGCAATCACAATTAACTTAGTTAGAAT
TGTTTTGATGGTGTAGGGAAACTACCTGTTCTTTGTGGAACCCAGCTCCATAGGGAATAG
TGGTCTTGAAGTTGAGATCCTCANCANGTTCTCGTATGGGATCCTCCCT
GenBank Accession CR405098 [GenBank]
Graphic View Graphic view of gene At2g12480
Predicted Position of Insertion Chr2:5069680 - go to primer design
BLAST e Value 2e-100
Hit Clone Code (BAC ID) T27D6
Hit Gene Code At2g12480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine carboxypeptidase-like 43
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37