SimpleSearch - Line and FST details


Line specific information

 
Line ID 001C10
Vector Used pAC106
Line Availability line died - no seeds available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 7104, 9732, 9820, 74587, 74592

Gene hit At3g05660

 
Sequence (A. th genome BLAST matches underlined) 
>75-K025787-022-001-C10-8409
TTTTTCGCGTATAATCCGGAATGAACCATTTACAATTGAATATATCCTGATATCTGAGAA
CACAAGCTGATGACGATTAACCGATCCCAGAGTAGGGTACCCTGCCTAGTTGACGTTAAT
ATCTACTCGCATCTCAAGTTGCTAGGAAACCTTTACCTATCCCATTCCAACACCACCACT
ACAATTGACTTGAATGCAGTCTTATCATGTTTCAAGATGCTCATTTCATTGGATCTCTCA
GGCAACCATGTTTTAGTCACAAACAAAAGTTCAGTTTCTGACCCTCCTTTGGGATTGATA
GGCTCTTTGAACTTATCAGGATGCGGTATCACCGAGTTTCCAGATATCCTAAGAACGCAA
CGCCAAATGAGGACGCTAGACATTTCCAACAACAAAATCAAAGGCCAAGTGCCTAGCTGG
TTACTATTACAGTTGGAGTATGGGATCCTCCCTATAGTGAGANTCNNCANACNACTCGGC
TTGTCCCATTCACCTCATCGAATACCTTCATCAATCTCCTCACACATCT
GenBank Accession FR799764 [GenBank]
Graphic View Graphic view of gene At3g05660
Predicted Position of Insertion Chr3:1651022 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F18C1
Hit Gene Code At3g05660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation receptor like protein 33
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit FR799765 [GenBank]

Gene hit At3g06365

 
Sequence (A. th genome BLAST matches underlined) 
>75-K026818-022-001-C10-8409
GAAGCCTGTACAATTGAATATATCCTGACCCTCCAGAGAGTGATCGCTCCTGAGGCTGAC
TACTATCCTCCGCTGCGTAAGAAAAGCCATCCTCTTTGTATTAGATACCGGCGAAAGAGG
AGCCCTTTGAGCTTGACTCTAAACCAACTTTGGGATGTGGCAGTTCAGGAGCTGAAGTAG
TGCAATCTACCGCGAGTATGTGAACGGCGGGGGGTAAAGTTATTTTACTTACTCCGTGAA
TCGGAGGCGGAGTATGTTATCCTCCCTATCGGGAGAAAAATTAAACGAAAGAAAATAATC
TATCCAATAAGGAGTGATAATAGAGGTAAGATGACGAAGATGGAGAAACACAGGCGTAAG
AGGGACAGAAAGACGGAGGGCACGAAGAAGGAGGGAGAGAG
GenBank Accession FR799767 [GenBank]
Graphic View Graphic view of gene At3g06365
Predicted Position of Insertion Chr3:14202427 - go to primer design
BLAST e Value 4e-09
Hit Clone Code (BAC ID) F21A14
Hit Gene Code At3g06365 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation novel transcribed region
Insertion Classification TS2TE
Confirmation Status unknown
Other FSTs Supporting this Hit FR799767 [GenBank]


Last Updated on 10.06.2021 13:37