SimpleSearch - Line and FST details


Line specific information

 
Line ID 008F03
Vector Used pAC106
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair 12496
Parent of pair(s) none
Note

Gene hit At4g00580

 
Sequence (A. th genome BLAST matches underlined) 
>22-K014800-022-008-F03-8409
GCCTATGGGATCCTCCTTTCATCGAGGCGGAATGTGTATGAGTAGGCGTGAAGTAGGCGA
AGCATCGACAGGTTCCTCTTGATCTACATCACAAATATTCTGATTCTCTTCCAACCTATG
GGATCCTCCCTTAGAGTGAG
GenBank Accession AL751893 [GenBank]
Graphic View Graphic view of gene At4g00580
Predicted Position of Insertion Chr4:249602 - go to primer design
BLAST e Value 3e-23
Hit Clone Code (BAC ID) F6N23
Hit Gene Code At4g00580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation COP1-interacting protein-like protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit At2g07669

 
Sequence (A. th genome BLAST matches underlined) 
>58-K016981w-022-008-F03T-8409
CTTCCTTCTTCTGCTCTGAATGTGTATAACTAGGCGATAAGCTTGCGAAGAAATCTTCCC
TGTGATTCGTTGGATATGAGAAAGGGACTACCGCTTCATATCACTAAGGTCCCCCTCTAC
GTCTTGAAGGTCTTCTTCCTGACATATGCCTGCATACCGCTGTGCATCTTCCAATACCTT
TCTTTGTTCTCTGCTAATAAGTAGCATGACAAGGTCATCTTGTTGGACGCTTGTCCCTGT
CTGACTTTCGAGCTCCCCTATGTACAATCTGCGTTCTGCTGTCAGTTAATAATCTCCTCC
TCTCTTTGTTCGGATGGGAACTATTGTATCTGTTGTTAACCCTTGTATCTGGCTACGCCG
CCCTTAGAAGCAGAGTAGCCAGTCCAGTAGGTGTAGTTAGTTATCTGTTCAAGTAGGTAG
GAGGAACCCAGCTTCTCCTATCTCATAGGAGGAACCCGTAGAATCAATATCTTTTCTTTC
TTTCCACAGAAGGTCAGCGGTCATACTCTTCGTACTGTTGTTAGCTGTTCCTGTTCCAGA
CGAAGTAAAGTAGCCGGGTCAGTCTCTTACTCGGAGAAGAACGCCTACTACTCGACTAAT
AGGAGAGGAACGCCTTTTGACTTCTTTCTCTTTCGAAAAAAGGAATGTAGTTAGCCTAAT
CACTGGGATGATGATTGGATCAGTTTAACTACTCCTGTTAAGTCTACATCAGGAGGTCAA
CTAAGCCCGCAGGTATATTTGCAGGCACCTGAACGAGTTGAC
GenBank Accession AL935895 [GenBank]
Graphic View Graphic view of gene At2g07669
Predicted Position of Insertion Chr2:3283215 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T17H1
Hit Gene Code At2g07669 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification TS2TE (5')
Confirmation Status unknown
Other FSTs Supporting this Hit AL935895 [GenBank]


Last Updated on 10.06.2021 13:37