SimpleSearch - Line and FST details


Line specific information

 
Line ID 011D02
Vector Used pAC106
Line Availability available as T3 set from NASC (N400998)
Segregation Analysis 50:49:41
Confirmed for Hit At1g23010
Parent of DUPLO pair 12774
Parent of pair(s) none

Gene hit At1g23010

 
Sequence (A. th genome BLAST matches underlined) 
>12-K013046-022-011-D02-35St
NAATAGACGTAAGGGATGACGCATCAATCCACTATCCTTCGCAGACCCTTCCTCTATATA
AGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGGGTAAACC
TAAGACATTATAGATTTGACCAACACTATAGATTAGATTATAGTGTCCATTTACAATTGA
TTCATAGGGCAAACCATTGACTAACAAATGAGTTGGCTCATCAGAGTTACTCACATACTC
GTACATAGAGATGTAACGCGTGAGAACGGCGTTTGACACGTCAGCATTCGGATAATTGAT
GAGCTTCTTGGGAATTGTACATGTGTCATCCTCTGATTCATTGTTGATGATAAATTTCAT
TACCTTGCCATTTTCTTCGTTGACAGGATCACCACTATGGGATC
GenBank Accession AL752178 [GenBank]
Graphic View Graphic view of gene At1g23010
Predicted Position of Insertion Chr1:8149016 - go to primer design
BLAST e Value 3e-119
Hit Clone Code (BAC ID) F19G10
Hit Gene Code At1g23010 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cupredoxin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL752177 [GenBank] AL752178 [GenBank]

Gene hit T20H2

 
Sequence (A. th genome BLAST matches underlined) 
>12-K012257-022-011-D02-8409
CTGAAAACAATTATGTGAGGATTAATATGTTTCTCTTCAGGATCATTAAATAAATTTATT
ATGATACTTTGGTAGACCACCAAGAAAGTACTGGACAAAAATATATAGATTTAAAACAAA
AATTTGTAAAGATTCAAGAGAAGGGAAAACTTTTACTATTTTAATTTGTAGAAAATTTAG
AAGTAGCTTATGTTATCGCATGGATAATGCTGAATTTAATTTTAAGAGACCGACCTTCGT
TGACAGTGACGAAACATGATGCCGAGAATTAATAAACGGTTAATCATTGGCTGATTATAT
ATGTAATTAAGGCAAAACTAAAAGCCGAAGTACTATGGGATCCTCCCTATAGTGAGGCGT
NNAAATCAANGGCTGAGGTACTGCATCTTCACATACATTGAGCACTTGGAGCTAGACCTA
TGGGATCCTCCCTATAGAGAGTCGATTTACT
GenBank Accession AL752173 [GenBank]
Graphic View Graphic view of sequence AL752173 of line 011D02
Predicted Position of Insertion Chr1:6930009 - go to primer design
BLAST e Value 3e-153
Hit Clone Code (BAC ID) T20H2
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit AL752174 [GenBank] AL752173 [GenBank]


Last Updated on 10.06.2021 13:37