SimpleSearch - Line and FST details


Line specific information

 
Line ID 015D05
Vector Used pAC106
Line Availability available as T3 set from NASC (N401385)
Segregation Analysis 50:45:41
Confirmed for Hit At5g19120
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g19120

 
Sequence (A. th genome BLAST matches underlined) 
>36-K019122-022-015-D05-8409
AAGACATCCACTGTGGAATACTCGCCGGATCGTCCCCCCTTGTCTCTCTCTCTGATCGCC
GCCATGTGGCTCTTGTACGGACTTCTTATCTAATACAAGATACACTTGCTGTACTATATA
TTGTAGACATTTTCACATTGCTCTTTCCTTATTCTCACTACGGAAAACTCACACTTCACT
CATTCATCGCATTTTTAGTTTTCTAACGATACATCACACCTCTAACTGCTAATTACCATG
CGACAACTATGGGATCCCCCCTAATAGAGGGTCTTTTTTTTTTTATTCGCCAACCCACAA
CCAACTATGGGATCCTCCCNTATAGGGTGAGGCGCGNGAAAGAAAAAAAAAAAAAACGGG
GGGGGGGGGGGGGGGGCTTCCTCCCCTCGGCATTGGCACTTCCCCTGACATCACACATCA
GCAAGTAATGGGCACAGAGCCCCGTTGGAATGGCTACCTTGGGGGGGACCCCCCGGACAG
AAATGAGCATGAGGGGGGCTATGTGAGGCAAGCAAAGAGGGATTCCCACTTGTTTCTTCC
AATGG
GenBank Accession BX284974 [GenBank]
Graphic View Graphic view of gene At5g19120
Predicted Position of Insertion Chr5:6415745 - go to primer design
BLAST e Value 2e-33
Hit Clone Code (BAC ID) T24G5
Hit Gene Code At5g19120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Eukaryotic aspartyl protease family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR800407 [GenBank] BX284974 [GenBank]


Last Updated on 10.06.2021 13:37