SimpleSearch - Line and FST details


Line specific information

 
Line ID 015H03
Vector Used pAC106
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 70174, 70202, 70253, 70334, 70337, 70341, 70346, 70347, 70351, 70357

Gene hit F22J12

 
Sequence (A. th genome BLAST matches underlined) 
>02-K017012-022-015-H03T-8409
TGATCTGAAATTTCCCGGACATGAAGCCTTTACATTGAATATTTCCCATACCCTTAGCCT
AACCTTATTTCAGCCAAAGATCATTTGTGTGTGATTGTGAAGTCTTTTTCGATTGAACTT
GGTATAACGTGTTAGGTATGAGCCGACAAGAGCAGTATTTCATGTAGACCTATGGGATCC
TCCCTATAGTGAGAANGNACCNTGTGGCANCTACNCTGCAATTGTCATCTCATAAAGTCA
GAATCCCTTCCCTCAATCAAAAATTTGCGTCACCCCTTCCATAGAGAGCACAGAAGGTCT
GACCACTATGGGATCCTCCCTATAGTGAG
GenBank Accession FR800435 [GenBank]
Graphic View Graphic view of sequence FR800435 of line 015H03
Predicted Position of Insertion Chr3:15458285 - go to primer design
BLAST e Value 8e-64
Hit Clone Code (BAC ID) F22J12
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g45430

 
Sequence (A. th genome BLAST matches underlined) 
>02-K017011-022-015-H03T-8409
GATCCTGAGATTTCCCGGACTGAAGCCATGTACATTGCATATTGCGTGCATACTCTAATA
GGCTTAGAGAAATTGATGGCTCCAATATTTGCTTATTTACATACTGAAAATAGATTCGAC
CTTTACCCTCAGACACCAATAATGTCAGAAACCAAATAATCTATCCTTACTCTGTACAGA
ATATCATCTATTCAAAGTATCTTGTGAAAGCTACGATGCAAGTGTCATCTGATTTAGTCA
GAATGCCATACCTCAATCAAAAAGTTGCATCACACCTTCCTGTAAAGATGCGCAGAAGGT
CTGACCGCTATGGGATCCTCCCTTATAGTGAGATCATTTTTTTTCTTAAGTTTTTGCCTT
GAACGACTGGAACAACAAACATATCTTGCCGACACGACTATTCTACATTATGAATTAATT
TTACTAATTCATATAGATTAAGAATTGCTGCTATGGGATCCTCCCAATCAGTGAGAGANN
ATTTGNGTTTCATAATAACCCTTTTTCGGAATAACTCTTATGTACCTTGCCTATGG
GenBank Accession AL936005 [GenBank]
Graphic View Graphic view of gene At5g45430
Predicted Position of Insertion Chr5:18408535 - go to primer design
BLAST e Value 7e-55
Hit Clone Code (BAC ID) MFC19
Hit Gene Code At5g45430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status unknown
Other FSTs Supporting this Hit BX285017 [GenBank] BX285017 [GenBank]


Last Updated on 10.06.2021 13:37