SimpleSearch - Line and FST details
Line specific information
| Line ID | 019G08 |
| Vector Used | pAC106 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 7213, 7225, 9955 |
| Note |
Gene hit At2g23780
| Sequence (A. th genome BLAST matches underlined) | >63-K013477-022-019-G08-8409 NTGATCCATGTAGATATTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGTAGAT CCCTAAGAAGCTGAGATTGGGACGAAACAAAAGAGTGCTACCATACATTTTGGGAAAAAA CAGACGTCTTACTGTTGTAGGGAAAGAAAGTTCCAGGCTATCTCTGACTTTTGGTTTTTC TCGTCCTTTTTCCATATATTTTATTTGGAAGTTTTGATCGATCATTGGGCCGATTATATT AATTTCTAAACTGATATTGGGCCTGATTAGCTACAACAACACATTTTGGTAGATAAGATG ATGCCAACAGCTCGTTTTAAACGTAAGCTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | AL753136 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:10124534 - go to primer design |
| BLAST e Value | 2e-98 |
| Hit Clone Code (BAC ID) | F27L4 |
| Hit Gene Code | At2g23780 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RING/U-box superfamily protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
Gene hit At5g05100
| Sequence (A. th genome BLAST matches underlined) | >63-K025794-022-019-G08-8409 CCATTTACAGAATGTAGATTGCTGATCTTTTTCATAAAACAGTGAACCTGAACATTAATT CTAAGGTGCATTCAATCAGAAGAATCAACGATTAAAAACAAAACAAAATTTGTTTGGAAA TACGTTGACTCTGTTTTCTATGTTGACCATAAGAACAAGAAAATGTAATCATTGACCCAT AAAACTCCACACTTCCACGTCTATCTACTCTAAACGGGCCACAACCTTTACAGGCCGGCC CATCGTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | CR395398 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr5:1505063 - go to primer design |
| BLAST e Value | 9e-115 |
| Hit Clone Code (BAC ID) | MUG13 |
| Hit Gene Code | At5g05100 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Single-stranded nucleic acid binding R3H protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | CR394997 [GenBank] CR395398 [GenBank] |
Gene hit At3g62260
| Sequence (A. th genome BLAST matches underlined) | >72-K017011-022-019-G08T-8409 GATCTGTAGATTCCNGGACATGAGCCATTTACAATTGATATATCCTGCGCATAAACACAA GATCTGACAGAGCGGTGGTACACAAGAATCGCTGATACTGCAATCCTCTGCCAAAGCTAT GGGATCCTCCCTATAGTGAG |
| GenBank Accession | AL936118 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:23039359 - go to primer design |
| BLAST e Value | 1e-16 |
| Hit Clone Code (BAC ID) | T17J13 |
| Hit Gene Code | At3g62260 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Protein phosphatase 2C family protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 019A12 |
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Last Updated on 10.06.2021 13:37 |
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