SimpleSearch - Line and FST details


Line specific information

 
Line ID 020E07
Vector Used pAC106
Line Availability available as T3 set from NASC (N401879)
Segregation Analysis 50:48:45
Confirmed for Hit At3g44150
Parent of DUPLO pair 12139
Parent of pair(s) none

Gene hit At3g44150

 
Sequence (A. th genome BLAST matches underlined) 
>53-K013161-022-020-E07-8409
CCGGGAAGAAGGCGGAGGTGTTGTTGGAGAGGAGAGAGATCTCGACGATTTTAGGACGGT
ATACAGAGAACTGTGAATTCATGGTGGTGAGGGAAAGGCGGCGGGCACAGGTACATATAA
GAACCGTTTGGTTTATGAAGAAGGAGGGACGAGAAGAGAATGCGATACCGAATGTGAATC
CATCTGATCTTTGGATTCGGGTGTGGGATCCTGCCTATTATGAGTCGTTGTAGTCACCTG
AACCTCCGCTGCCTCTGCCTAATGCTCCGGTTAGAATCACCGCGGACAAGACGAGGAGTG
TTAGGGCTTCCTACTAGAACATTTTGTTT
GenBank Accession AL753263 [GenBank]
Graphic View Graphic view of gene At3g44150
Predicted Position of Insertion Chr3:15887977 - go to primer design
BLAST e Value 1e-93
Hit Clone Code (BAC ID) F26G5
Hit Gene Code At3g44150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Expp1 protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL753263 [GenBank]

Gene hit At5g19540

 
Sequence (A. th genome BLAST matches underlined) 
>53-K026163-022-020-E07-8409
TATTTTCTCTCTTGGTTATAACTGGTTTGGTTAATCATATTCAGTTATTTGGTTCGGTTT
ACTAATAATTCACCTAATTTTTTTTTGTGGCCAAATTACAACCATGTAAACTTCCATCTG
GTTGAAAAATGGCGAAATATCTTCTCCACATCACACACTAGTTCTTCTTCTGCTCAATCT
CAACTATCCCGTAAAACAAAAACGAGGGAGGAACCATGGCGGTGAGCTCATTCGCCGTCC
TTCCTCCATTTGGTTCCTCATACAGCTCCACAACCGATAGATCTTCTTCTTCTTCATTTT
ACTCATCTTCGAAACTTCTCCGCATATCTCAATACCGGTTCCAGTCAAATTCCCGTTGTC
CAAATGTGTTCGTCTCGTGCTCACTGAATCAGCCTTCTGATGATGCTTCCGACGCCGCCC
TTTTTCTCGAATCCAATTCAATTGCTGATTACATGCGGTTCAAACGCCGTCCCGACCCCG
GAAATGGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR395462 [GenBank]
Graphic View Graphic view of gene At5g19540
Predicted Position of Insertion Chr5:6595537 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T20D1
Hit Gene Code At5g19540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation thermosome subunit gamma
Insertion Classification TS2TE (5')
Confirmation Status unknown
Other FSTs Supporting this Hit CR395463 [GenBank] BX285033 [GenBank] AL753264 [GenBank] AL753264 [GenBank]


Last Updated on 10.06.2021 13:37