SimpleSearch - Line and FST details


Line specific information

 
Line ID 031C02
Vector Used pAC106
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 9549

Gene hit At1g06290

 
Sequence (A. th genome BLAST matches underlined) 
>11-K014862-022-031-C02-8409
TTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAGTATATGCTGTTCTT
TAGCACTTTACTACTCTTATCGCAACTTAATATCCCTTCGCACTTCCCTATGTGTGATCC
TACCTATAAGTGAGACCGACCGGTCAACTACAAAAGAACCAAGAAATTAAAAGTGATTTT
GATTTTTGATCATCTCTCAGACCGGTGCACTATTGTATCAACTGTTGTAAACCTATGGGA
TCCTCCCTTTAAGTGAG
GenBank Accession AL762977 [GenBank]
Graphic View Graphic view of gene At1g06290
Predicted Position of Insertion Chr1:1922187 - go to primer design
BLAST e Value 4e-50
Hit Clone Code (BAC ID) F9P14
Hit Gene Code At1g06290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation acyl-CoA oxidase 3
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At1g78210

 
Sequence (A. th genome BLAST matches underlined) 
>11-K113048-0022-031-C02-8409
GTAATTTGTCGTTTTATCAAAATGTACTTTCATTTTATAATAACGCATCGGACATCTACA
TTTTTGAATTGAAAAAAAATTGGTAATTACTCTGTCTTTTTCTCCATATTGACCATCATA
TACATTGCTGATCCATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCT
GTCATTTACAGTTTACGACCTTATCCCAACTAAAATCCCTTCGTACTTCCCTAACCTGAC
AAAGAAACTAAAANNNNCNNNNGGNTCNNCTNCNNNNGANCCNNNANNNTTACCGTGATT
TTGATTTTTGATCTTCTCTCATACCGGTGCACTATTGTATCAACTGTTGTAAACCTAACC
TGCCCGGCCGCTAAACNNGGTTNNNNNNNNNCGGTCTNCGNCCCGTNCCCNTCGNCTTGN
NNGATGGAACCGTAGTTCTCTTTTGGGTATCCNAAACCNAACCCGAATCCAAACCCAAAC
CTAATCTCCTCCTCATCCCCGGCCTCGGAGCTTCTGCCATCTGGCAATGGTACGACGTAN
CTNGCGGGCTCTCAAGTAAATTCAACCTCTACATCCCCGACCTA
GenBank Accession FR800846 [GenBank]
Graphic View Graphic view of gene At1g78210
Predicted Position of Insertion Chr1:29424672 - go to primer design
BLAST e Value 4e-57
Hit Clone Code (BAC ID) T11I11
Hit Gene Code At1g78210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha/beta-Hydrolases superfamily protein
Insertion Classification Promoter
Confirmation Status unknown
Other FSTs Supporting this Hit FR800845 [GenBank]


Last Updated on 10.06.2021 13:37