SimpleSearch - Line and FST details


Line specific information

 
Line ID 031C06
Vector Used pAC106
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 11806
Note

Gene hit At5g51790

 
Sequence (A. th genome BLAST matches underlined) 
>43-K014862-022-031-C06-8409
TGATCCATGTAGATTTCCCGGACTGAAGCACTTACATTGAAATATGCTGATTGTCGAGCG
TTGCTTTGAGACGAACATATTCTATTCTCCTCTAACATTATTTAGCCCTTTGATTTCCTA
GACGTGCAGAAGGGTAACTAATACCTAGAGTTTGAGAGCGAACCTTATAAACATCTTGTT
TCACATACGCGTGACACTATTCTATCAACTGTAGCAAACCTATGGTATCCTCCCTTAAGT
GAGGCGGCGAGATCTTTTGTCCTTGTTCGCGTGTTTGTGACGACACTTACTGCTGCGGCT
ACATGATCTGACGAGGGTTCTCTTTCCCTGCGATCAAAGAGCCT
GenBank Accession FR800848 [GenBank]
Graphic View Graphic view of gene At5g51790
Predicted Position of Insertion Chr5:21040320 - go to primer design
BLAST e Value 7e-12
Hit Clone Code (BAC ID) MIO24
Hit Gene Code At5g51790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit X7J

 
Sequence (A. th genome BLAST matches underlined) 
>43-K014871-022-031-C06-8409
TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGAATGT
AGAGTTTGCAATTGAGATGAAACAAAATAAAATACAAATCTAAGAAGATTTAACCACTTT
GATTTCCAGGACATGGAAAAGGGAAATTAATCAATAGAGTTTGAGAGCAAACCTTTAAAA
CATCTTGATAGAGATTGAATGATAAGAAGCTATGGGATCCT
GenBank Accession CR769928 [GenBank]
Graphic View Graphic view of sequence CR769928 of line 031C06
Predicted Position of Insertion Chr1:21745226 - go to primer design
BLAST e Value 1e-78
Hit Clone Code (BAC ID) X7J
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit CR769928 [GenBank]


Last Updated on 10.06.2021 13:37