SimpleSearch - Line and FST details
Line specific information
| Line ID | 035A11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N403275) |
| Segregation Analysis | 100:91:70 |
| Confirmed for Hit | At2g14910 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 10094, 10098, 10099, 10104, 10123, 11269, 92948, 92958, 92959 |
Gene hit At2g14910
| Sequence (A. th genome BLAST matches underlined) | >81-K015008-022-035-A11-8409 TGTCCTGTAGATTTCCCGGACATGAAATTGGTTACGCAAGTTTTTTTGGACACGAAAGGA GTTTGCTTTTAAATCCTTCAATCTAATCCTTTCCTCCTATAGAATCCTCCCTATAGTAGA AGAGNNNNNNGNTNCNNNTTNNCCCTTTTTTTTAAGGTTAAAAATAGGATGGGGCCCACA TCACAATGAAAAAAGACAANGTATCCTAATGAATAGGTATTGACGAGAGAGCATACCCAG TCGTCCTTGAAGATACCATCCGCGGAGACATAGGTTCCCAAGGGGACTCAACATGAACCT GCAACCCTATCAGATGGAGGAACACCCATCACGCCCGAGAATGATCTTTCCATTGCATCC AAAGTAAAATCTGAGCAATCCCGCCGAATCAAACTCACATCCAAAGGAGTAATCTCTTGA ATAAAATCAGAAAGG |
| GenBank Accession | AL763251 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:6408401 - go to primer design |
| BLAST e Value | 2e-33 |
| Hit Clone Code (BAC ID) | T26I20 |
| Hit Gene Code | At2g14910 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | MAR-binding filament-like protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At4g01930
| Sequence (A. th genome BLAST matches underlined) | >81-K015038-022-035-A11-8409 NTGATCCATGTAGATTATCCCGCACATGAAAACCTTTTACAATGATATATATATCACGAT TTAAGCACGGCATTATAAAACTCCTCTTTGATAAATTCTCCCAACATTGATAACTCCCCA ACTCTATGTAATTCAAGCTTCCAGTTTCCACTATACCTAAAGGCTAAAACTAAGCTATGG GATCCTCCCTTGAGTGAGAGNNNNNNNNNNNNNCNTNNCTGNTNNCTTNNNNNCGNNTAC AACANTCACCTTTCCTCATATCATTCCAAGGCAACATATGATGCTTGTGGATCAACGGCA GTGACACTCCCTCACAATCCATGGTCAAAAATTGGATCTGAAATCTCAAAACTCAAAAAT CTTCTCTCGGTAATCTCAACGATCGATGCTCTTATAAAATTAATCGGAATAAATATAAAT GGAAGAAGAGGTCTCTCCGCCCCTAATGAGAGGAAAAGGCCATTGGGCTA |
| GenBank Accession | BX942849 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:840497 - go to primer design |
| BLAST e Value | 4e-115 |
| Hit Clone Code (BAC ID) | T7B11 |
| Hit Gene Code | At4g01930 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Cysteine/Histidine-rich C1 domain family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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