SimpleSearch - Line and FST details


Line specific information

 
Line ID 038B08
Vector Used pAC161
Line Availability available as T3 set from NASC (N403572)
Segregation Analysis 50:44:34
Confirmed for Hit At2g24850
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At1g62330

 
Sequence (A. th genome BLAST matches underlined) 
>58-K030252-022-038-B08-8409
TTTTGTCGTCTTTGTTAGATTTGCCAACGTCGGGAAACCGAAGGCGGGAAACGACAATCT
GATCCCCGGGTATGGGATCCTCCCTATAGTGAGTCGTATTAGCTCACTTTTT
GenBank Accession CR934188 [GenBank]
Graphic View Graphic view of gene At1g62330
Predicted Position of Insertion Chr1:23049392 - go to primer design
BLAST e Value 2e-08
Hit Clone Code (BAC ID) F24O1
Hit Gene Code At1g62330 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation O-fucosyltransferase family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 159E04
Other FSTs Supporting this Hit CR934188 [GenBank]

Gene hit At2g24850

 
Sequence (A. th genome BLAST matches underlined) 
>58-K015215-022-038-B08-8409
GTGATCCATGGTAGATTTCCCGGACATGAATGCCTTTACAATGTTGAATAATATCAAAAA
TGATTTTGATTTCTGCACGAAGCTAGTTAGTGAGGAGAGTCTTATCCTTATACCAGGTAT
TGATCTCTTTAACAATATACAACATCTTAAGAACTTGGGGCTCCCATAGTCATCTTCTTA
CATATGATTTTAATTTATAAATTTGCATCGTTAATTATGATCAATCTTTTTTTATTTACT
TATTTATATTTATTTTGTGTTGAAATTTTTAGGAGTGGCCCTATGGGATCCTCCCTTAGG
TGAGAACAAAAGAANGAGNATTTCCCAATTTTTTTTCAATTCAAAA
GenBank Accession AL763582 [GenBank]
Graphic View Graphic view of gene At2g24850
Predicted Position of Insertion Chr2:10583476 - go to primer design
BLAST e Value 5e-102
Hit Clone Code (BAC ID) F27C12
Hit Gene Code At2g24850 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation tyrosine aminotransferase 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37