SimpleSearch - Line and FST details


Line specific information

 
Line ID 039G02
Vector Used pAC161
Line Availability available as T3 set from NASC (N403722)
Segregation Analysis 50:19:14
Confirmed for Hit At2g29490
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At2g29490

 
Sequence (A. th genome BLAST matches underlined) 
>15-K015216-022-039-G02-8409
NTTTTGATCCATGTAGCATTTCCTGGACATGAANGCCTTTACAATTGAATATATCGGAAG
ACAAATGATCTTAACAATGATGCTATGGGATCCTCCCTATGAATGAGAGGACATGCGCTC
AATTTGTTTCTCTCTAGGAAGACATACATCCCCTCACTGCCTCAACTTCTTTCAAATTCT
TGATCCATCTATTTAATTCCGGAAGCTTCTGCTCAGGAATCATATCAATACCAATAGCCT
TTCTCAAAGCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL763722 [GenBank]
Graphic View Graphic view of gene At2g29490
Predicted Position of Insertion Chr2:12631573 - go to primer design
BLAST e Value 6e-43
Hit Clone Code (BAC ID) F16P2
Hit Gene Code At2g29490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glutathione S-transferase TAU 1
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g19190

 
Sequence (A. th genome BLAST matches underlined) 
>15-K030268-022-039-G02-8409
CTTTACATCGAATATATTCCTGGCCAAACCTACAATTGAAGAGTATCAGCAAAATCATGA
GAACTCAAGAAGTATGGGATCCTCCCTATAGTGAGTCGTATTACTCATGTTCTATGGGAT
CTTCCCTTTCGTACGTCTCATTTTACCTTCTCTTTTTTAATTTGATCTTACTCTTTCTTT
TTCGCCTCATCTCATCTTATGGTTTTTCCCCAGATTTTTTTTTTTTATAATATTTTTTAC
TCGGCTCCCCCCCTCTCTCACGATCTCAAAGTATTTGAACGCAGGTATGGGATCCTCCCT
ATAGTGAGTCNTATTACTC
GenBank Accession FR801114 [GenBank]
Graphic View Graphic view of gene At5g19190
Predicted Position of Insertion Chr5:6457763 - go to primer design
BLAST e Value 2e-11
Hit Clone Code (BAC ID) T24G5
Hit Gene Code At5g19190 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 165A11


Last Updated on 10.06.2021 13:37