SimpleSearch - Line and FST details
Line specific information
| Line ID | 040B12 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | 12828 |
| Parent of pair(s) | none |
| Note |
Gene hit At4g13800
| Sequence (A. th genome BLAST matches underlined) | >90-K030254-022-040-B12-8409 AGCCATTTACATTGAAGCCATGTAGATAGAAGCAAAGGAAAACGACGAATCTTAACATAT AAACAAACAATGTCACAAGAAACAGCTGCGACTATACCAAATCTAGGATCTTTCGAATTG TTTCTCAAAAGATTAACGAATCCAAAGAAAAAAAATTAAGACCCACAAAAAATTTCACTT TTTATACGTTACCTTGTCCACAATAATAAAATCAAATCACCAGTAAATGAAACAAAATCA AAAAGAAGAAAATATCTGGAAGCTAGAGAAGTAGCAATAGAATATTCGAATCGTATCAAA CCTTTTTCATCTCTTCCATTTTTGTATGGGATCCTCCCTATAGTGAGTCGTATTACTCAC TATTTTTAAAAAATCCC |
| GenBank Accession | CR934372 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:8004182 - go to primer design |
| BLAST e Value | 3e-74 |
| Hit Clone Code (BAC ID) | F18A5 |
| Hit Gene Code | At4g13800 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | magnesium transporter NIPA (DUF803) |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
Gene hit At1g12240
| Sequence (A. th genome BLAST matches underlined) | >90-K015218-022-040-B12-8409 AAACCGGTGTGTGCTAAACATGCTATCTGTGGTAAGTACCGAGAATCCGAATGGCCCTAA AGCCCACGGACGGCGGAGCCTACGCTTTTTTCGCAGCTAAATTCCTCGGCTTCAGCCACT ACCGAAGCGTTTCCGATGATTTTGCCTATGGGATCCTCCCTATAGTGAGATAATAGTGAT AAAGAAAAAAGAGGTAAAAACCAATGTGTGAAAATTCCTTTTTTTGTGTGCACCATAAAA AAGGGGCCCACCTACCTTCCATTTGGCCCAATCTCCATTCCTTGGACACATATCTCTGGA CCAAGAAGGAAAGGAGACGCACTAGGGAATGGGACAGTGAAACAATTCCACTGCGCTCAT CTGTCATGGGACACCACATGTAAGAAAAAATA |
| GenBank Accession | AL763756 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:4156955 - go to primer design |
| BLAST e Value | 1e-50 |
| Hit Clone Code (BAC ID) | T28K15 |
| Hit Gene Code | At1g12240 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Glycosyl hydrolases family 32 protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
Gene hit At3g60210
| Sequence (A. th genome BLAST matches underlined) | >90-K028725-022-040-B12-8409 ACACCTCTCCTCTCACCTCTCCCCCCGTTTTTCCCTACAAACAATTTGGATGTTGTGTAT GGGAACCTCGCGGTGGGGGGGGGNNAATAANNATTTTTTTTTTTNTGTTAGGTCTCACTA TAGGGAGGATCCCN |
| GenBank Accession | FR801141 [GenBank] |
| Graphic View |
|
| Predicted Position of Insertion | Chr3:22252883 - go to primer design |
| BLAST e Value | 0.015 |
| Hit Clone Code (BAC ID) | T2O9 |
| Hit Gene Code | At3g60210 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | GroES-like family protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR801141 [GenBank] |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
