SimpleSearch - Line and FST details


Line specific information

 
Line ID 040F10
Vector Used pAC161
Line Availability available as T3 set from NASC (N403814)
Segregation Analysis 50:30:26
Confirmed for Hit At2g16660
Parent of DUPLO pair 2532
Parent of pair(s) none

Gene hit At2g16660

 
Sequence (A. th genome BLAST matches underlined) 
>78-K028793-022-040-F10-8409
AGTTGAAAAACTATATACGTCACGCTTACAGCTCTGCAATGAATGTTGGTAGTTAATGTA
AGAACGAGAATTGATACTTTCAATGTTAGCATCGTATGGGATCCTCCCTATAGTGAGACN
TATTNC
GenBank Accession CR934449 [GenBank]
Graphic View Graphic view of gene At2g16660
Predicted Position of Insertion Chr2:7219785 - go to primer design
BLAST e Value 3e-41
Hit Clone Code (BAC ID) T24I21
Hit Gene Code At2g16660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Major facilitator superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR934448 [GenBank]

Gene hit At2g41580

 
Sequence (A. th genome BLAST matches underlined) 
>78-K015218-022-040-F10-8409
NTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTTATTTGAGATCTTCTCATTAGTT
CTGAGGTTATGAACAATTTCATGTGCAAGAATGATATTATCAGAAACTAACCTCTCTGCC
CAAAAGCCGATTGAGTTGGTGAGACTATGACTGGAAGATATTTCTTGAGCCTATGGGATC
CTCCCTATAGTGAG
GenBank Accession AL763790 [GenBank]
Graphic View Graphic view of gene At2g41580
Predicted Position of Insertion Chr2:17340693 - go to primer design
BLAST e Value 3e-63
Hit Clone Code (BAC ID) T32G6
Hit Gene Code At2g41580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown


Last Updated on 10.06.2021 13:37