SimpleSearch - Line and FST details


Line specific information

 
Line ID 044A02
Vector Used pAC161
Line Availability available as T3 set from NASC (N404130)
Segregation Analysis 50:44:32
Confirmed for Hit At3g12080
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g12080

 
Sequence (A. th genome BLAST matches underlined) 
>41-K105033-0022-044-A02C-3144
CCTTCGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACC
CGGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTTTGACTTACACTC
ACCAACACCCGCATTCCTCTCGCTTCCCTTTCCTTGTTGCAGCAACTCTGGATGGTTCCT
CTGCTGAGGAAGAGCTAGATTTCGAGGAATTCGACCAATATGCTGAAGATAACTTCGCAG
ATGATTATTCGGATGACGAAGACGACTCCATCGATATCTCCGTTCTTGAGAAAGAAGCGA
GAGATATCGTGAGAGATTATGCTACCACTCTGTCTCGCGAGCTCAAAATCGGTAATTTCT
TCCCTGTTTTTATTGTGCATATGTGTGGAATACACTGTCAGTGTGTGATCATAGTTTGAT
GTTTCCAGAGGATGAGACCATTGAGGGGAAGGAAACTCGTAGAAAAGGGAAAAGGCTAGC
CAAAAATGTTAGTCAATTGAATTTTTGAATTTTTTCTTTGTTAGTTTATCTACGAGGCTT
CAGATTACTGACATGACTATNAAATAAAATAAAAACCAGACACAGCAGATACCAGAGCAT
CTTCTCCAAAGAGTTGCTATAGTTGGAAGGCCTAATGTCGGAAAATCAGCATTGTTCAAC
CGCCTTGTTGGGGTAAGTTT
GenBank Accession HG968636 [GenBank]
Graphic View Graphic view of gene At3g12080
Predicted Position of Insertion Chr3:3847999 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T21B14
Hit Gene Code At3g12080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GTP-binding family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR395950 [GenBank] AL763934 [GenBank]


Last Updated on 10.06.2021 13:37