SimpleSearch - Line and FST details


Line specific information

 
Line ID 045F05
Vector Used pAC161
Line Availability available as T3 set from NASC (N404289)
Segregation Analysis 50:21:17
Confirmed for Hit At1g52420
Parent of DUPLO pair 1130
Parent of pair(s) none
Note

Gene hit At1g52420

 
Sequence (A. th genome BLAST matches underlined) 
>38-K015502-022-045-F05-8409
TTGCTTCGATTGTCACTCTACCAAATGACTCACCAACTCCCTGTAAAAAATCAAGGTTCA
AAATAAATAAACCGAACAAAATCTAAATGGTCTAACCGAAATCAAAACCTACGTTTTGAA
CAAAACAAAACTGAAATGTTTTATCCAAAACCAAACTGAAATCAATCACAAATTGGTTTA
TTTGATTCAGATAATTCAAGTTCCTATAAAACTGATAAAACTAAACCAAAACCTAACTGT
AAACTACTTCCTATGGGATCCTCCCTGTAGTGAGAGGANAAAAAGAAAGAGTAATTACCA
ATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTTATTATA
GenBank Accession AL764038 [GenBank]
Graphic View Graphic view of gene At1g52420
Predicted Position of Insertion Chr1:19530753 - go to primer design
BLAST e Value 1e-62
Hit Clone Code (BAC ID) F19K6
Hit Gene Code At1g52420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation UDP-Glycosyltransferase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g18190

 
Sequence (A. th genome BLAST matches underlined) 
>38-K015475-022-045-F05-8409
NTTTTGATCCATGTAGCATTTCCTGGACATGAAGCACTTGCTTCGATTGTCACTCTACCA
AATGTTTCACCAACTCCCTGTAAAAAATCAAGGTTCAAAATAAATAAACCGAACAAAATC
GAAATGGTCAAACCGAAATCAAAACCTACATTTTGAACAAAAACAAAACTGAAATGTTTT
ATCCAAAACCAAACTGAAATCAATCACAAATTGGTTTATTTGATTCAGTAATTCAAGTTC
CTATAAAACTGATAAAACTAAACCAAAACCTAACTGTAAACTACTTTCTATGGGATCCTC
CCTATAGTGAGACCTAATTCGACTGCTTTTGCGGCCTCCCTCTGGAATTAACCACGTTAC
TACTACTACTCTTCTTTCCATCAGATACCAAAGGATTTTTCCCCAAATTCCCATGTCTTT
TTCCATCCTTCTTCAATCCCCGAATCGCAGATGTTCCACCAGGACTACGAGACGTAGAAG
TGCTGGTCCTCTGATTTGGAGTACTCAGAAGTTCTGTCCAATCATTGTCAGTGAGTTTAG
TATTATCTTGTGTCAAACTTTGTGACGGTGCACTTGTCCTTTCGTGTGATTGATCTGGTC
TGCGTACTTTTTTGCTGCTACTTAAGTAGCTATGGGATCCTC
GenBank Accession AL764037 [GenBank]
Graphic View Graphic view of gene At1g18190
Predicted Position of Insertion Chr1:6260154 - go to primer design
BLAST e Value 2e-166
Hit Clone Code (BAC ID) T10F20
Hit Gene Code At1g18190 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation golgin Putative 2
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 016D06


Last Updated on 10.06.2021 13:37