SimpleSearch - Line and FST details
Line specific information
| Line ID | 046E09 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3946, 3960, 80970, 80977, 80983, 80987, 80990, 80992 |
| Note |
Gene hit At4g33920
| Sequence (A. th genome BLAST matches underlined) | >69-K016075-022-046-E09-8409 TGTCCTGTAGATTTCCTGGAGCTGAAGCCATTTACAATTGAAGAAGCGGCAAAGAAGAGA GAAATGAGATATGGAGATATATAAGAAAATAGCCAAACGAATTCGACGACATTTCCATGA CGACATAAGCGTTATTGTAGTTTATCTATGGGATCCTCCCTATAGTGAGAGGCGACAACG ATTCCTTGTCACCATTTTTTTTTTCGTTCAAAATTGAAGAGGTCCTCCCTATAATT |
| GenBank Accession | AL936190 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:16262467 - go to primer design |
| BLAST e Value | 1e-47 |
| Hit Clone Code (BAC ID) | F17I5 |
| Hit Gene Code | At4g33920 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Protein phosphatase 2C family protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
Gene hit T14K23
| Sequence (A. th genome BLAST matches underlined) | >69-K016080-022-046-E09-8409 TTTCCCGGACTGAAGCCATTATATTGAATGAAACATACCTTTTGATAAGAATGAAAGACG AATCATTCTTGAGGAGATTTCAGATGATATTCTGAAAAACTTCTTTGAAAACAACATTTG TTGTTTGCTTTTGAATCTTCCCTGCTTTATCTAGAATCTGAAGTGACCCTATGGGATCCT CCCCTATAGTGAG |
| GenBank Accession | AL936191 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:14533861 - go to primer design |
| BLAST e Value | 6e-77 |
| Hit Clone Code (BAC ID) | T14K23 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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