SimpleSearch - Line and FST details
Line specific information
| Line ID | 051A06 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 89500, 89505, 89511, 89523, 89525, 89529, 89533, 89534, 89535 |
| Note |
Gene hit At1g73580
| Sequence (A. th genome BLAST matches underlined) | >41-K012139-022-051-A6-8409 GTGGATTTACGTTTCGCTTGACCACTTTGGTGTTTGAGTTTCTGCAATACACATAGTGAA TTATGAGTTTTTGAAAAAATTAATCGTTGAAGTTTGAGGATTTCGATAGAGAAAGTGACA TAGAGAGAACCTGACGACCTATGGGATCCTCCCTATAGTGAGTCTGTACTTACTCACACT ACTTAGGCTTTTATGAGCGGGTTGCGGTTTACGCTGTACTACTACTGCCTCTCGTTACAT CATGTCATCTTTGACTCCCTAGGACTAACCAGCCTTCTTCTATGGGATCCTCCCTATAGT GAGGCGTATTACTCACTTGANNGTAACNGCCTATGCCGGAACCAGCTCATAAAAGCTTAA GTAGTGTTTCCTTGCGAGAACCTACATAGCCGACGACTCATACCGGACTTTGGCTACACC ATGAAAGGTTTGAGA |
| GenBank Accession | FR801355 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:27655088 - go to primer design |
| BLAST e Value | 9e-36 |
| Hit Clone Code (BAC ID) | F6D5 |
| Hit Gene Code | At1g73580 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Calcium-dependent lipid-binding (CaLB domain) family protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
Gene hit At5g65270
| Sequence (A. th genome BLAST matches underlined) | >41-K012184-022-051-A06-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTCTGACAGGATATATTTGTCGGTTCTACCTAATAGAATAGAGCG CCTATTACATTCACCTGATATTTAAAAGGGCGTGAAAAGGTTTATCCGTTCGCCCATCTG TATGTGCACTGCCAACCACATGGTTACCCTCGGTAGTGCTTGGCATTCCGTGCCATATTG ACTTCTGCTCCACCACCCCAACCGCATAAAGACCTGTCTACTGAGCATCATTCCAAAAAG ATCCCTCGTCTCGTCTGGGTCTGCTATCGGATGCTCCCTCTAGAGAGGTTATTACGACAG AGAGACGTTGAAGAAGATGACTATGGGATCCTCCCTATAGTGAGTCTTNTTAC |
| GenBank Accession | FR801356 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:26083419 - go to primer design |
| BLAST e Value | 1e-04 |
| Hit Clone Code (BAC ID) | MQN23 |
| Hit Gene Code | At5g65270 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RAB GTPase homolog A4A |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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