SimpleSearch - Line and FST details
Line specific information
| Line ID | 052G04 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6638, 6641, 6645, 7880, 8932, 8933, 8934, 8935, 10708, 10709, 10713, 11069, 11435, 11436, 11440, 11442, 81038, 81039, 81040, 81041, 81043, 81044, 81045 |
Gene hit At3g41768
| Sequence (A. th genome BLAST matches underlined) | >31-K012482-022-052-G04-8409 GTTTGATCCATGTAGACTTTCCCTTACATGAGAGCCTTTACACTTGATTTTTTTCTGTCC GACTTTGTTTGTGCGTTGCCCGTTTTGACCCTTCGGGCGGCGACACGCTCCTGGTCTTAA TTGGCCGGGGCATGCCTCCGACACTGTCACTTTGAATAAACAACAGTGCTCAAAGCTAGC CTACGCTCTGGATCTTTATCATGGGATAACATAATAAGATTTGGATCCTATTGTGCCGGC CAAAGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGGATTTCATAGTCAG AGGAGAAATCCTTGGATTGGTGAAAGACGAACAACTGCGAAAGCATTTGCCGGGGATGCT GTCATTAATCACCAACGAAAGTTGGGGGCTCGAACACGATCACATACCGGCCTATGGGAT CCTCCCTATAGCGAGAATCTGGGGGAGGCCCAAAGGAGTTAAACCCAAAGGGGTTTTTAC TTTTTTTGGGATAAGGGCAAAACAAGGCACTTAAGAACTTTTTTTTCGAAACCGAAAGGA AATC |
| GenBank Accession | AL753845 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:14198337 - go to primer design |
| BLAST e Value | 3e-94 |
| Hit Clone Code (BAC ID) | F21A14 |
| Hit Gene Code | At3g41768 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | rRNA |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
Gene hit At3g20075
| Sequence (A. th genome BLAST matches underlined) | >31-K012359-022-052-G04-8409 TGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACACATTTTTTTTTTTGATAAAAA AATTTATTTGGGCCCCCCTTGGGACCATAATTGTCCTTCCCTTGAAGGTCCCAAAAGTTT CCTTGGGAACTTAATCCAAATTTCCTTTGTATAAACAATCCTGATGGATTATGGCCTCCG GATTCCTTTTGTTTCATCACCCTCCCAAAAAAACCATGGATTTCCCCGTGGACGCTAAAA ACCCCTTAATTTTCATCCTTTAAGGTCTTTTCTCATTTCTTTGGGGCTATCTTTTTTTCA AAAACCCTAGGGAGGGTTTTATACCAAATAAAATATGGAAATTTTGGGGGACCCCGGAAA AAAGGACCCAAGGGCACTTCAAAAGGGAAACTTGAGGGCCGTATGGTAAAGGCTAAGAAG GAAAAACCCTGAATTTGGGGGAGGCCCAAAGGAGTTAAACCCAAAAAGGTTTTTACCTTC TTTGGGAACAGGGCAAAACAATCCCCTTCAGACCATTTTTTTCGAAACCGGAAGGAAATC CTTTTGGGAGAAAAATTTAAGTTCCTTTTTTGTAGGACCTGCAATTGGAAAGATGTTGCA ATGCTTTACCGGAAAACCACAGGA |
| GenBank Accession | AL753844 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:7006985 - go to primer design |
| BLAST e Value | 2e-15 |
| Hit Clone Code (BAC ID) | MAL21 |
| Hit Gene Code | At3g20075 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | 5' region |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR801554 [GenBank] AL753844 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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