SimpleSearch - Line and FST details


Line specific information

 
Line ID 054G02
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 515
Note

Gene hit At5g48730

 
Sequence (A. th genome BLAST matches underlined) 
>15-K012471-022-054-G02-8409
NTTTGATCCATGTAGATTTCCCGTACATGAANGCATTTACAATTGGTAATATAACACGTA
CAACTCCAAAATTTTAATGAGCGATAGGGGGTAGCTTAATTACTTCCTAGGACGCCTAGC
TATTAAGTACCACCAGGACCGCCTAGCCGGTTTGTATGGTCAAGTATTCGAAAAAACAAA
TGCTTTTGTCTCCTTGCATATTGTGGCTCCTTGTATCAACCCCTTATTACCATTTCGATG
TTATGATCTTTGCGGTAATCCTTTGGGTATGATGTTCCAACTTGCAAGGCTCTGGGATGC
TACATATCTTGAGCGATGGCGATATAATAGCTTCTGCTTCCTTCAAAGGATTTGCATGCG
AACCAACCTTAAATGCTTCTGACTCCTTCTAGACCGCTATAGGAGGCCCCTTAAATACGT
GAATATGTATGCTGGGAACCGATGCATGCGCCAACGTCATTATCCTATGGAGCATCTAAA
CACTATAATGAGTGTAAATGACTCGCTTGGAACGATGGGATACTTACTATAGATGGAATA
CTTATTTAAACTGATGCACTCAAAGAGAATTTTCCCGAGTTGTGTTACACTATGTTCTCT
TGATCCGGCTTAAGGAAGAGCTATGGGATCCTCCCTATAGGGGACACCGCGCCCCGCTCT
GGATTTTCACTTAAAGCTCACCCCCCCTACACTTATCATTATCAACGACTGGATCGAATA
ACCCCACCCTGAATTTATCTCCCCGGGCCCCCTTATCCACTCGGCGTCCTCATAATGCCT
TCGCGCACCCCCCCACTACCCCCCCCTCCAAACCCACTATCATCTTCCCCCCTCGTTCTG
TTGATCTTCTCACCTTCCATCTCCTC
GenBank Accession AL754528 [GenBank]
Graphic View Graphic view of gene At5g48730
Predicted Position of Insertion Chr5:19764276 - go to primer design
BLAST e Value 2e-27
Hit Clone Code (BAC ID) K24G6
Hit Gene Code At5g48730 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pentatricopeptide repeat (PPR) superfamily protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit At5g00650

 
Sequence (A. th genome BLAST matches underlined) 
>15-K012301-022-054-G02-8409
AGAATGAGCAATTTGACAGAATAAATAACAAGTAATTGGCTCTTCAATCCTATGGGATCC
TCCCTATAGTGAGNNN
GenBank Accession AL754525 [GenBank]
Graphic View Graphic view of gene At5g00650
Predicted Position of Insertion Chr5:21142963 - go to primer design
BLAST e Value 2e-18
Hit Clone Code (BAC ID) MSG15
Hit Gene Code At5g00650 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation novel transcribed region
Insertion Classification TS2TE
Confirmation Status unknown
Other FSTs Supporting this Hit AL754526 [GenBank] AL754526 [GenBank] AL754527 [GenBank]


Last Updated on 10.06.2021 13:37