SimpleSearch - Line and FST details
Line specific information
| Line ID | 055D07 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405227) |
| Segregation Analysis | 50:46:31 |
| Confirmed for Hit | At1g35510 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g35510
| Sequence (A. th genome BLAST matches underlined) | >52-K012470-022-055-D07-8409 TGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAATATCTCTGGGGCCTA TGTTTACTCTCTCTGTGATCGAATGGTATGTCTCGTTTCTTGATGTATATATGTGATGCA GTTGCTGTGGCTGGACTGCTGAATGCTACTCTTGTCATTCCGATTTTTCACTTAAACAGT GTATGGCGTGATTCCAGGTTACTATTGTGGTTTCTAATCTTCAGATCAAGTTGCTATCTT TGGCAGCATGGTTTACTTACAGATTCCTTTTGCTTTTTCCTATTTTGGGTTGGTTACAGC AAATTTGGTGATATATTTGATGAAGACTTCTTCATATATGCTCTTAGTAAGAATGTGAAT GTTGTGAAAGAGCTCCCAAAAGATGTACTTGAGCGATATAACTACAATATAAGCAGTATT GTTAATTTGAGATTAAAAGCTTGGTCGAGTCCAGCGTACTATCTCCAGAAGGTGCTTCCA CAACTTTTGCGTTTGGGGTATGCCATTCACTGACGTTTTCTTTTTCTATTTAGTTGTCTT AGTCTTGATAGTTAACATGCAAAATGACATGGATTGATAGTAAGGTAGAGAGCTATGGGA TCCTCC |
| GenBank Accession | AL754739 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:13072144 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F15O4 |
| Hit Gene Code | At1g35510 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | O-fucosyltransferase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL754739 [GenBank] |
Gene hit At3g03440
| Sequence (A. th genome BLAST matches underlined) | >52-K012296-022-055-D07-35St TGACGTAAGGGATGACGCACAATCCACTATCCTTCGAAGACCCTTCCTCTATATAGGAAG TTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCGG TTTTCCGGGAACATGCCGTTGGCGTGCTTTTAACGCTCTGTCAAAGCGATAGGAGTAAAT ACAGAGAGCCAATTCTTAGAGAATGTGTAATACCGGGACTGCTTGAGCTCACGGTTCAGG GGACATCCAAATCTCGGATTAAAGCTCAAAGACTTCTCTGTTTACTAAGGAACTCGGAAA GCTCGAGATCATATGTCCAACCCGATACAATAGAAAACATAGTGTCAAGCTTAATCTCTC ATATCGACGGAGATGATCACTCCGGTAAAGCAAAGAAGATGCTATGGGATGCTCCCTATA GCGAGTCGTATTAGCTAACGGGCCCCCCCTCGAGGTCGATCCAACCCCTCCGCTGCTATA GTGCAGTCGGCTTCTGACGTTCAGTGCAGCCGTCTTCTGAAAACGACATGTCGCACAAGT CCTAAGTTACGCGACAGGCTGCCGCCCTGCCCTTTTCCTGGCGTTTTCTTGTCGCGTGTT TTAGTCGCATAAAGGAGATTACTTGCGACTATGGGATCCTCCCTAAGTGAGGCGTTTTAC T |
| GenBank Accession | AL754735 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:818212 - go to primer design |
| BLAST e Value | 2e-132 |
| Hit Clone Code (BAC ID) | T21P5 |
| Hit Gene Code | At3g03440 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ARM repeat superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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