SimpleSearch - Line and FST details
Line specific information
| Line ID | 055E10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405242) |
| Segregation Analysis | 100:98:82 |
| Confirmed for Hit | At1g01580 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 96841, 96844, 96846, 96848 |
Gene hit At1g01580
| Sequence (A. th genome BLAST matches underlined) | >77-K012479-022-055-E10-8409 TCTTCTCCTTATCTTCGGATATGTGGTGGCCCACATACAAGTCCGGCCGCCAGAGCTATC TCTCCGGCCAAATTTGAGACACCTTTCGTATCCCACATGATCATCTGCCATTAATTTATT CCACGTCAGATTATAATATACTATACCGTTTAAATTACGATTCTTGTACCCCTATGGGAT CCTCCCTATAGTGAATGGAGCTCACTTTCTCCAAAAACTCTATGGGGTACTTTCTGTCCA GTCGGCTAGTTGTAGATGAAAAGTTCACCCTTACTGGATATTGATCTGAGTGTAAACTAT TCTTTCTGTTTTATACAGCTGGTTTATAGCCCGACGAGCATAATGTTTGTGAGCATACCG AGCATTTCAAAGCTGCAATGGCATCCGTTTACGATAACTTCCAGTATGAAACTCGAACCA GAGAAGCTGAGTATTGTTATCATGAGAGATAGCACATGGTCAGCTAAGCTTCACCAGAGG CTTTCTTCTTCTGATCAGATCGACCGACTTGCTGTTTCTGTAGAAGGTCCTTACGGCCCT GCTTTCGGCGATTTCTTTAAGTGATTTGTTTATATACCCTTTCTAAGTCACCTATCTAAT AACTTTATATTCAGA |
| GenBank Accession | CR356259 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:211202 - go to primer design |
| BLAST e Value | 1e-164 |
| Hit Clone Code (BAC ID) | F22L4 |
| Hit Gene Code | At1g01580 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ferric reduction oxidase 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | FR801872 [GenBank] FR801872 [GenBank] FR801873 [GenBank] |
Gene hit MNC6
| Sequence (A. th genome BLAST matches underlined) | >77-K012296-022-055-E10-35St GTGACGAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAGGAAG TTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATAGTCACATATTCAATTGTA AATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGA GAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGT TATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATAG GCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACATTC ACGTCCAAATGGGGGCTTAGATGAGAAACTTCACGATCGATGCCTTGATTTCGCCATTCC CAGATACCCATTTCATCTTCAGATTGGTCTGAGATTATGCGAAAATATACACTCATATAC ATAAATACTGACAGTTTGAGCTACCAATTCAGTGTAGCCCATTACCTTACATAATTCACT CAAATGCTATGGGATCCTCCCTAT |
| GenBank Accession | FR801871 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:21768086 - go to primer design |
| BLAST e Value | 0.35 |
| Hit Clone Code (BAC ID) | MNC6 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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