SimpleSearch - Line and FST details


Line specific information

 
Line ID 059D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N405610)
Segregation Analysis 50:46:30
Confirmed for Hit At1g69770
Parent of DUPLO pair none
Parent of pair(s) 11676, 89395, 89398, 89401, 89404, 89405, 89406

Gene hit At4g24430

 
Sequence (A. th genome BLAST matches underlined) 
>44-K013873-022-059-D06-8409
GTGATCCATGTAGATTTCCCNGACATGAANGCATTATCCTACTCAGACAAGGATTGTCTA
CAAGCTTCGTAAAGACAAGTACTAAAGTTAATATCAATCTTTCCCTTAAAACCAATATTA
GTATATACTCATGTGGAAAGAAAACTTGCAGGTTTAAATATATGGCGATTGCTGATAACA
GGCAGAGGAAAATGCCACTTGCAGAGGATATATTGGGGAAAAGAGGAACACCTTTGGCTT
ATCCTGAAGCTGTTCTTCTTGTTCATCCTGTAGAAGACGAGTTTAAAGGAGAGGTTGATG
ACCAGTATGACTATTCCAGTGATAACACATATCTGAACGTGCCTGGCTGGATCTCACATA
ACTCGCATTTGGGGGGCCCGCAAACGATTCCTATGGCGCCCCCCCTATTCCGAGCCGTCC
CTCATCCCCCCGCACTCCCCCCCCCGTTGAAACTACCCGTCGTCCGCC
GenBank Accession AL754952 [GenBank]
Graphic View Graphic view of gene At4g24430
Predicted Position of Insertion Chr4:12630775 - go to primer design
BLAST e Value 9e-144
Hit Clone Code (BAC ID) T22A6
Hit Gene Code At4g24430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Rhamnogalacturonate lyase family protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g69770

 
Sequence (A. th genome BLAST matches underlined) 
>44-K013872-022-059-D06-8409
GTGATCCATTGTAGATTTCCCGCACATGAAGCACTTGTTGACAAGATTGTTGGTATTTCC
TTCGGAGTCCCTAAAAAGTTATTGAAACGTGGACTTTATTTGAAGGTATTGTTGCTCTGC
TTGTACAAATTTCACATTACATCTCATGGTTTAGCCTTGTTATATAGTTAATCATCTCTG
GTGTTTTGATATAATAGGTAAGGTGGCTGAATTATGATGATTCTCATGATACATGGGAGC
CTATTGAAGGACTCACGTGAGCAAAACATTAAGAATGTTTGCATTAAAGTTATATATGTT
AATGCGTTGTTAAAATCTCTAAATTTGTCCTTGAACAGTACTTGCCGGGGTAAAATTGAA
GAGTTCCTTCAACTTGGCATATAAATCTGCCATCCTTCC
GenBank Accession AL754951 [GenBank]
Graphic View Graphic view of gene At1g69770
Predicted Position of Insertion Chr1:26251145 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T6C23
Hit Gene Code At1g69770 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation chromomethylase 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR770040 [GenBank]


Last Updated on 10.06.2021 13:37