SimpleSearch - Line and FST details


Line specific information

 
Line ID 060H05
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 12483

Gene hit At1g01220

 
Sequence (A. th genome BLAST matches underlined) 
>40-K027724-022-060-H05-8409
GAAGCCATTTACATTGAATATATCCTGTCCGAGGCACGAGGAGCATCCCCGGTGTATGAT
TATCCTCACTCTTGAGACCCTAATTAGACAGCGTCTTTTTGATCCCCGTGGTTGGGAACC
TCCCCTTATTGATGCATATTCCCCTCTGTCTCTTTGCCTCTGCCATTTTTGAAAGTTTCT
TCTTTTGCAATCTTCTTAGAGTTTGTTTTGGGGGGGCAAATTTANCANATCCTTTATGTA
TGGGATCCTCCCTATAGTGAGTCNTATTANNN
GenBank Accession CR770107 [GenBank]
Graphic View Graphic view of gene At1g01220
Predicted Position of Insertion Chr1:91284 - go to primer design
BLAST e Value 5e-30
Hit Clone Code (BAC ID) F6F3
Hit Gene Code At1g01220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation L-fucokinase/GDP-L-fucose pyrophosphorylase
Insertion Classification Promoter
Confirmation Status unknown
Other FSTs Supporting this Hit CR934524 [GenBank] CR934524 [GenBank] CR770108 [GenBank]

Gene hit T16B24

 
Sequence (A. th genome BLAST matches underlined) 
>40-K114295-0022-060-H05-8409
ACGGATCGTATTCTTGTCTCTTTATCGCATGGACTCTAATTTTATAATAACGCTGCGGAC
ATCTACATTTTTGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTTTCTCCATATTGAC
CATCATACTCATTGCTGATCCATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAAT
ATATCCTGGCTTTTTCCCTAATCTTTTGATTGATTACTGTGGCTTTTTCCCTCTTGTTTT
ATGACGATGCAATTTAAATTCACCAATCTAACATGCCCGGCAGCT
GenBank Accession HE664253 [GenBank]
Graphic View Graphic view of sequence HE664253 of line 060H05
Predicted Position of Insertion Chr2:16328824 - go to primer design
BLAST e Value 6e-34
Hit Clone Code (BAC ID) T16B24
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit HE664253 [GenBank]


Last Updated on 10.06.2021 13:37