SimpleSearch - Line and FST details


Line specific information

 
Line ID 071G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N406798)
Segregation Analysis 50:46:34
Confirmed for Hit At1g80560
Parent of DUPLO pair none
Parent of pair(s) 69314, 97487

Gene hit At1g80560

 
Sequence (A. th genome BLAST matches underlined) 
>47-011734-strizhov-G6-oriL
TTGATCCATGTAGTATTTCCCGGACAGTGAAGCCTGTACAAAATTGGTAATTACTCTTTC
TTTTTCTCCAGTTCTGAATCCGTTGTTCAGAGCAACCAACACTGCGTCTTCAATTCTCTT
GGCTGCCTTTTCTTCTCCAAGTCCGTATTTCAAAAGCATTGCAGCGCTTAAAATGGTTGC
CAATGGGTTTGCCTTATCCTGAAAATTCAAAGAATCAACAAGTTGTGCTCTTTGATTTTG
GCATTAAACTATGGGATCCTCCCTATAGTGAGTCGATTTACTCANNNGNGGNNTCTTCTT
CGATGGTCTTTTTTTTATTATAATGATGGCGGTTTTAGGAGGAACCTTCTTTCTTCTCTA
TTTTCACAACAAAAAAACGAAAAACTGGTCGACGGAATAATACGAGGAGGCCGGCAATTA
TCCTCTTTTGAAAAAAATTAATAACCGTTCGGTGTTCTGTGAAGGCAGCTTCGATGATAT
TGGAGGAAACAACAGAGTAGTGCTGCACCATCTTGGCTAAGAAAATCTTCTT
GenBank Accession AL768262 [GenBank]
Graphic View Graphic view of gene At1g80560
Predicted Position of Insertion Chr1:30289891 - go to primer design
BLAST e Value 1e-96
Hit Clone Code (BAC ID) F5I6
Hit Gene Code At1g80560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation isopropylmalate dehydrogenase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37