SimpleSearch - Line and FST details
Line specific information
| Line ID | 072E02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N406866) |
| Segregation Analysis | 50:30:24 |
| Confirmed for Hit | At3g06850 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5465, 5573, 5620, 5691, 10376, 81507, 81536, 81553, 81574 |
Gene hit At3g06850
| Sequence (A. th genome BLAST matches underlined) | >13-011722-strizhov-E2-35St CTGACGTAAGGGATGNACGCACAATCCCCTATCCTTCGCAAGACCCTTCCTCTATATAAG GAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCT TCGGTTTAAACTATCATCTGTTTGATACTCGAACAGAAACAAACACACGGGTACGTAACA TTTATCTTTTTAAGCTCTCTTCTTAGAAACATCTTCCATCAACTCAATCTGTTTGTCTAT TTCTTCTCCCTTGTACTGTTTTTTGTTTTTTACCAAAGACCAACCGTTCATAACAATGAT CGCGCGACGGATCTGGCGAAGCCACCGGTTTCTCCGCCCATTCAGCTCGTCATCTGTTTG CTCTCCGCCGTTCCGGGTACCGGAGTATCTTTCTCAGTCGTCTTCCTCTCCGGCGTCGCG CCCATTCTTTGTTCACCCTCCCACTGTATGTTTCTTCTCACCAAATTTCCTTCCTTTTTC AGNTNTTTTTTTTCAANTAATTTTGAGGGATGACATTAGCTTCCGAGAAACTCTTCTAGG |
| GenBank Accession | AL768317 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:2160617 - go to primer design |
| BLAST e Value | 1e-176 |
| Hit Clone Code (BAC ID) | F3E22 |
| Hit Gene Code | At3g06850 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | 2-oxoacid dehydrogenases acyltransferase family protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g28470
| Sequence (A. th genome BLAST matches underlined) | >13-011723-strizhov-E2-oriL TTGATCCATGTAGAATTTCCCGGACATTGAAGCCTTTACAATTGAATATATCCTGACATC AAAACCCGAAATCTACATGTAGATTTAGCGGGTTTTTTTTGTGTGTGTGTGCAACAGTGG TTTCCCAGTGTGGTTGCATTTTGTTCCAGGAATTAAGTTTCGAACTGATAATGAGCCATT TAAGGTATTGTTTAAGTGATGTGTCATTTATTGTTTTAAATGTATAGTTGAGTTGTTTAA GATGGGTTTGGTTTATGTTGTTGTAGGAAGAAATGCAGAGATTTACCACAAAGATTGTTG ATTTGATGAAGCAAGAAAAGCTTTATGCATCACAAGGAGGTCCAATCATTCTCTCGCAGG TTGATTTTTTTTTCTTTCTGATAACTATGGGATCCTCCCTATAGTGAGTCGTATTCACTC ANNNNNNNNNNNNNNNTNNNNNNNCNNNNNNANNNANANNANANAGNAAAAAAAAAAAAA NNAAAAAAGAAAGGAAAACCTATAACGGCGGTATCGCTATTGGTTTGACAGATGAAAATA ATCGACCTCCGAGAAAAAAGTATGGTCCTTTTAGATGAGACAGAAACCCTATACTGCTCT CTAAAGAAAGCCATGGTTTTGTGGTGAGTTGTGTTG |
| GenBank Accession | AL768318 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:12172566 - go to primer design |
| BLAST e Value | 1e-140 |
| Hit Clone Code (BAC ID) | T17D12 |
| Hit Gene Code | At2g28470 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | beta-galactosidase 8 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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