SimpleSearch - Line and FST details


Line specific information

 
Line ID 072F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N406888)
Segregation Analysis 50:45:41
Confirmed for Hit At5g61010
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g61010

 
Sequence (A. th genome BLAST matches underlined) 
>94-011723-strizhov-F12-oriL
TGATCCATGGTAGATTTCAATTGATAAATACGGATCGTTATATGTGATCCTGGATGCCAA
TTGGAGAAAGCTCCTAACCGACCTATGGGATCCTCCCTGATAGAGAGGCGTATTACTCAT
GATTGTTCATTCCGGAAACAGGAACCTTGGAATCAAACTCTGCCATAACCAAAACCAAAG
ACTATGGGATCCTCCCTATAGTGAGTCGTATTACTC
GenBank Accession AL768338 [GenBank]
Graphic View Graphic view of gene At5g61010
Predicted Position of Insertion Chr5:24554720 - go to primer design
BLAST e Value 8e-30
Hit Clone Code (BAC ID) MSL3
Hit Gene Code At5g61010 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation exocyst subunit exo70 family protein E2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g77220

 
Sequence (A. th genome BLAST matches underlined) 
>94-011722-strizhov-F12-35St
CTGACGTAAGGGATGNACGCACAATCCACTATCCTTCGCAAGACCCTTCCTCTATATAAG
GAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCT
TCGGTTTAAACATATTACAAGTTTTGTTGTAAACGAGCTAATAATAATAATTTCTACAAA
GAGATCGGACAAAAGAATAAAGTCCAATGAGGATGAGACACATCAGATTATTTAACATAA
CACGTCAGCAAATTAAGGGATCGAAGAAAATGGTTTAGCTTGACACAACCGCCAAAGCAA
AAAGGCTGAAGTTTTCCTTTTTAGGCTCTTTCTCTTCCACGCGGAAATTAATAATAAAAA
AGATCCAAACTTTGAAGATAGCGAAGAGCAAAAAGATAATCTCTGGCTCGATTTTTGTTG
GAGTCCTTGATTCGAGCAAGTTTAAAGACTCGAGGGTTTTCTTCTGGATAACGTAATTAG
ATACTCGTGTAAGTGCAATTTCTCTCTTTTTCTTCTGTTTTATGGGTGTTGGGGATT
GenBank Accession AL768337 [GenBank]
Graphic View Graphic view of gene At1g77220
Predicted Position of Insertion Chr1:29012510 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T14N5
Hit Gene Code At1g77220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation organic solute transporter ostalpha protein (DUF300)
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37