SimpleSearch - Line and FST details


Line specific information

 
Line ID 076B07
Vector Used pAC161
Line Availability available as T3 set from NASC (N407219)
Segregation Analysis 50:46:38
Confirmed for Hit At5g27530
Parent of DUPLO pair none
Parent of pair(s) 2803, 96729

Gene hit At5g27530

 
Sequence (A. th genome BLAST matches underlined) 
>50-011920-strizhov-B7-8409
TTTGATCCATGTAGATCTTCCCGGTACATGAAGGCCTTTAGCAATAGAATACTAGGCTGG
TGACACAGAGAAAGCATGGGCAGGCTATGCCATCCTATTATAAAGATACAACTTGATGTA
TAGAGATTGGAAGTGACATATTGTAAATCGTCTCTGGCAATCCACACTAGGCATATGCAT
AGTGAATCTAATCAATCTAAGAAATGTAAACACCAACAAAGTTGTATTTTATTTTATGTA
TATGAAGTTGGATGGTATCATTGTCGCATCTATGGGATCCTCCCTATANGTGANCGGCAG
CTGTCGCAACCACGCTCACTTTTGTCATATGTTTCAATTATCA
GenBank Accession AL768583 [GenBank]
Graphic View Graphic view of gene At5g27530
Predicted Position of Insertion Chr5:9718543 - go to primer design
BLAST e Value 8e-27
Hit Clone Code (BAC ID) F15A18
Hit Gene Code At5g27530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pectin lyase-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL768581 [GenBank] AL768583 [GenBank]


Last Updated on 10.06.2021 13:37