SimpleSearch - Line and FST details
Line specific information
| Line ID | 076C12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N407236) |
| Segregation Analysis | 50:49:43 |
| Confirmed for Hit | At1g22400 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4471, 9996, 9997, 10037, 10040 |
Gene hit At1g22400
| Sequence (A. th genome BLAST matches underlined) | >91-011919-strizhov-C12-8409 TTGATCCATGGTAGATTTCCCGGACATGAAGCCCTTTACATGAGAATAATACATGGGTTC ATTGGCAGCGATCTGCTCTAAAACGTGAAAGGCACTTAAAAAGCTTACTTCCTTTCAAAC TACTGGAAACAAATTCTATCAGTGCTTATTCATATGAATGGATCGGATAACTCAACGCAG CCTGTGGGATCCTCCACTATAGTGATCCGCTGGAGAAGCTCTCTGAACGGAGCGAGACAG TTCTTCATGGTGGACTCGCAAAGAGCTGTGATGTCCTGCGTGGCATCCATGTCTGTCTCT GGTAGACCGTCAGCAATGGACTCAAATCGGAACGAAGGAAGTCCACCTATGGGATCCTCC C |
| GenBank Accession | AL768623 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:7906130 - go to primer design |
| BLAST e Value | 4e-75 |
| Hit Clone Code (BAC ID) | F12K8 |
| Hit Gene Code | At1g22400 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | UDP-Glycosyltransferase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T12E18
| Sequence (A. th genome BLAST matches underlined) | >91-011889-strizhov-C12-8409 NTGATCCATGGTAGATTTCCCGGACATGAAGCCCTTTACAATAGAATATACATGGCGTTA TTGGCAGCGTATCTTCTCTAAAATGTGAAATGCACTTAAAAAGCTTACTTCCTTTTAAAC TCACTGGAAACAAATTCTTTCAGTGCTTATAATATCAATGGATCGGATAACTCAACGCAG TCTATGGGATCCTCCCTATGGTGAGCTCGTGTGACATACTCTCTGAACGGAGCGAGACAG TTCTTCATGGTGGACTCGCAAAGAGCTGCGATGTCCTGCGTGGCATCCATGTCTGTCTCT GGTAGACCGTCAGCAATGGACTCAAATCGGAACGAAGGAAGTCCATCTATGGGATCCTCC CTATAGTGAGTCGTTCTACTCATTAAGAAACAAACAACAATGAAGATACTTTACACCATT AATTTTTTTAATAATTGATGGACAGCACTACATAGTGGAGAAGAGGCCAATGTGAGATAT AACCCACCACATGGTAATGAGTATTGGGTAGTTTTGATACATTCCATAATATGCAACAAT ACATAATGCATTTATGTCGGTCTTCCACTTTCTACTCCTCACGTGAAACCTTTGATCTTT CTCTTTGAGAAAAAAAAAATTCAACTCAGTTTCTCGGACCTCTTAAACAATACCCCTCCA |
| GenBank Accession | AL768622 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:20143678 - go to primer design |
| BLAST e Value | 2e-120 |
| Hit Clone Code (BAC ID) | T12E18 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | AL768622 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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