SimpleSearch - Line and FST details


Line specific information

 
Line ID 076F06
Vector Used pAC161
Line Availability available as T3 set from NASC (N407266)
Segregation Analysis 50:38:33
Confirmed for Hit At5g53530
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g53530

 
Sequence (A. th genome BLAST matches underlined) 
>46-011889-strizhov-F6-8409
TTAAGTGGTTTGAAACAGGGACGAAACTATGTGCCAATGACTCCAATAAAAACAGCATTA
AGGTGAGTACTGATATGATTCAATGATACTGATTTCTTACCGATCTTGCTTTAGACAGAG
AATGGCCCCATGATATTCCATTTGCTTATTAGCATTACATACGCATAATTGCAGGGGACC
CTTACCCATAGAACAGACGGAAGTTGAAATCAAGGACTGCCTGCATATCAAGTTTGAGTA
CAATAAAAACAAGTAAGATAAACTGATTTTCCTAACTGTGGGTTCACAGCGATGTGGAAA
AGATAAAACAGCACCTAATTAATGTATGCTACTCGATGCAGGTATCACCTAAAAGAGGTT
ATCCTTGGGAAAATATACTCACTTCTGGTGAGAATCAACATATAGAGACTGGATCTTGAG
ATAAGACGGCGAGACTCAACTGGAGCAGGAGCTAATACTCACGTTTAAACAGAGACACTA
TGGGATCCTCCCTATAGGGAGTCGTTTTAACTCATGGGGATGGGGGAATGTTAATCGGAT
ACAGACCTATTACGAGAAAAAACACCTCCTATTAAAAGAATTTCCATAAAGCTCCTGATA
ACTATGGGATCCTCCCTATAGGGAGTCG
GenBank Accession AL768686 [GenBank]
Graphic View Graphic view of gene At5g53530
Predicted Position of Insertion Chr5:21747097 - go to primer design
BLAST e Value 2e-126
Hit Clone Code (BAC ID) MNC6
Hit Gene Code At5g53530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation vacuolar protein sorting 26A
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL768686 [GenBank]


Last Updated on 10.06.2021 13:37