SimpleSearch - Line and FST details


Line specific information

 
Line ID 080A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N407589)
Segregation Analysis 50:50:36
Confirmed for Hit At4g27530
Parent of DUPLO pair none
Parent of pair(s) 11675

Gene hit At4g27530

 
Sequence (A. th genome BLAST matches underlined) 
>33-K016175-022-080-A05-8409
TATATGATCCGATTTGGTGTATCGAGATTGGTTATGAAATTCAGATGCTATGGGATCCTT
CTTATAGTGAGATTATCCGGAAGTCCCCTGTCCAATTTGTTTATATATTAAGTGAGCACA
GCTACCCTATTTTATAATGAATAATTAATCTATCTTCAACAAATTTCAAAAACGTACGTG
GGATGCGAAGAAACTTAGAGCTAGTGATAGTAATGACTCCATCAACAACAGATCGAGAAC
TGTGGTTGTGATCTATGTGCAATGAAGAAGCTCTATGAAGGGTTATGGCTCCTCGCTTTG
CTAAAAACATAGCCGCTTTTTTCTACACTTTTCAATTCGTTATCTATGGGATCCTCCGTA
TAGTGAGAGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATG
TCCGCAGCCGTTATTATAAANNNNNNNNNNNNNN
GenBank Accession AL937393 [GenBank]
Graphic View Graphic view of gene At4g27530
Predicted Position of Insertion Chr4:13752938 - go to primer design
BLAST e Value 5e-77
Hit Clone Code (BAC ID) F27G19
Hit Gene Code At4g27530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37