SimpleSearch - Line and FST details


Line specific information

 
Line ID 082G04
Vector Used pAC161
Line Availability available as T3 set from NASC (N407852)
Segregation Analysis 50:32:28
Confirmed for Hit At1g25360
Parent of DUPLO pair none
Parent of pair(s) 95121, 95128, 95140, 95145, 95149, 95153, 95155

Gene hit At1g25360

 
Sequence (A. th genome BLAST matches underlined) 
>31-011866-strizhov-G4-35St
TGGCGTAAGGGATGACGCACAATCCCCTATCCTTCGCAAGACCCTTCCTCTATATAAGGA
AGTTCATTTCATTTGAAGAGGACAGGGATACCCTGCAGACCTTATGTAAAAAACCATCAC
CACCATAGAGACCTTGGACTAATCCACGTTTCTATGGGATCCTCCCTAAAGTGAGTCGTA
GTACTCAGCATCTAGCGCTAAAGACGCGAGAACACACGCGAGAGAGAAGGAGTCAGGTGT
GAATACTTTATGCTTCATCATACAAAGGAGGGTCCTACCTGAGACTACTATATGGGATGG
CGAAAAGACAACGATAAGGGACATCGAACATTACAGTAGTACGCCGACACGCAGGAACTT
TCTAAAAAACCCCTCAAGCGATGGTGAGGTCGCCGGAAGCACAACAGCCAGACACGATGG
CGGATGTATGGCATCCTCACTGAAGCGATGTGAGTTCACCATACCCAGATACCCATTTCA
TCTTCAGATTGGTCTGAGATTATGCGAAAATATACACTCATATACATAAATACTGACAGT
TTGAGCTACCAATTCAGTGTAGCCCATTACCTTACATAATTCACTCAAATGCTATGGGAT
CCTCCCTATAGTGAGTCGAATAACTC
GenBank Accession AL769027 [GenBank]
Graphic View Graphic view of gene At1g25360
Predicted Position of Insertion Chr1:8894945 - go to primer design
BLAST e Value 2e-09
Hit Clone Code (BAC ID) F4F7
Hit Gene Code At1g25360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pentatricopeptide repeat (PPR) superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37