SimpleSearch - Line and FST details


Line specific information

 
Line ID 083C06
Vector Used pAC161
Line Availability available as T3 set from NASC (N407902)
Segregation Analysis 50:38:33
Confirmed for Hit At5g15070
Parent of DUPLO pair 12060
Parent of pair(s) none

Gene hit At5g15070

 
Sequence (A. th genome BLAST matches underlined) 
>43-011868-strizhov-C6-8409
TTGATCCATTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATATCCTTACT
CGCTGTTGCGAAAGAAGTGTATACATATTTTATACCTAGCGTACACTGCCTTTTTATACT
GGATCACCTTTATTACCCTGATAACCGGTTCCTGCATAGGTCATTGGAATAGCGACCTAA
TATCTTCTATGGGGAAAGGTTCACATGACATCACCTGACTTACTTACTTCCCATCGGAAT
TTGTTATTCCTACTCTGTCTACGCAGGCGAAAGAATTGCTTCAGAGTGTGCATATTCACA
ACCCACACTGTAAACACAGGTTTCTTGGTATACTGTCTGCCAAAAACTCGACACAGACAA
GCTTCAGCCATGCCTTAGGCGAAAAAAAGAAGACATGTGCGAATACCCTTCCGACTTGGA
AAAAAATCCTTTGCAGGTTACTGCCGGACGCCTTAGCGGCATGAGGGCCTTGTCACGGGG
TCTGTCTCAATTTATGAGACCTGGCTAAACAAAAGCCTAAAACCCCGTTCAATGTTTTAA
GAAAGGTCAATGACCCTGGCCATGGATTAAAACAGAATAAGCCTATCTATGGGACCCTCC
CTTTATGGAGCGTATTNACACAAAGGGGGNAAGGGGGCAGGACNAAACGTACTTATTTGT
TTTCTTGCCCCACCTCTTTATGATCCTCTCAACCTTAGGGCCATTTTTTTTGGCCCTTAG
AAGTCTTANGCTTTTCTCACCCGGGGGAGTTGGGAAGCCACCGTAACTTTTTTACGCCTG
TTCGCGGTGAACTACCCCTTTTTTCGCGAACACCCCGACGGAGCGCCTCTATTGTGCGTC
GGTGGGGCTGGTGTGTTGAAAAAGCTGAATGGGCGGTGAAGAGAAAGAACAAGGGATATT
TTTTGGGCGAGAGGAGAGTGTTGCNGGACGTCGGTGGGGCGTCGAAACAAAAACAAGATA
A
GenBank Accession FR802415 [GenBank]
Graphic View Graphic view of gene At5g15070
Predicted Position of Insertion Chr5:4879575 - go to primer design
BLAST e Value 8e-24
Hit Clone Code (BAC ID) F2G14
Hit Gene Code At5g15070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phosphoglycerate mutase-like family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37