SimpleSearch - Line and FST details


Line specific information

 
Line ID 088F08
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 8961

Gene hit F11A3

 
Sequence (A. th genome BLAST matches underlined) 
>62-K016185-022-088-F08-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATACTCATTTCTCTTCGACT
TCCAAAATCATTTTTTATGATGAATGACTTCCAAAACATTACTAGAGCTATCTATTCCTC
AATCTTCATCATTTTTCCTTTGATCACATCAGATCATAGTAATTAAACTGCATCAGATAA
ACCGAATTAATTTCACCATTCCAATTAAGATAACACAAATGTTCGAGAAATAATATAAAC
AACATACAGTGAGAATATGTCATTTTTATAAGAAAGAAAGCGTGTGTTTTTGGCATGAAA
CATGTGAATGACTCAGTTTTTATTGATATGTTTCCTATGGGAT
GenBank Accession AL937712 [GenBank]
Graphic View Graphic view of sequence AL937712 of line 088F08
Predicted Position of Insertion Chr2:8778502 - go to primer design
BLAST e Value 1e-161
Hit Clone Code (BAC ID) F11A3
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g61840

 
Sequence (A. th genome BLAST matches underlined) 
>62-K016184-022-088-F08-8409
TATCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATGGCTATTTATTACTGTTT
CAAATTCAATATACCGGATAAACAAGACCGAACTACACTTTGCAGTTACAAAAGTTTACA
ACTAGGGGCACTCAACGGAATCCCGCTTTAACCCATAAAGAAAACACTTTTGCCCATTAA
ATACTGGGATGCGTTTATATCTTCTCAGACATTCCATTACATTGTTATTTATTAAAGTGA
AAAAGAGGCTGACAAGTAATGTTCAAGCCCCCAACTACTTTCCATTGCGAAAAATGGATC
CCTTTCGAACCACGCCCTATAAGCCATAAACTAATCTTCTTCAACTTTCTTCTTGCTTTC
TTCGCATATTCAAATGACAATCGCTGGGCTCTCAGCTGTCAACGCTGGGCGCGAGTGAGA
TCTATCAAGCGTGAGCAAATTTTGTATATTTTGTGTCCGGATCTGAAGTCTCAGATCTCG
GAGTTCCGGTTTTAGCAACTACTTCTACTGACATCTATAGTAGCTCTATGGGATACTGGN
CCTTTACATTCAGACATTAGATCAGAGATAAAGGTTAACTAAAACTCAAAGCACTTTGTT
CGTACAAAGAGAAGGAAATGGGTAAAATGAAAACCCTAAATTGCTACTTGCTATGGGATC
GCCCCCCCTATTGGGGGGAGCCCNNCGGAANCCGGANCCAACCAACTGAGCGAATTTCAG
GTGAGTTCTATCTCTCCCCCCTTTGGAAAAGAAAGGTAATCTATGGAATTTTGGGAATTC
TGCAGGTTCATAATTTTACTTGGAAGATGCAGCTTA
GenBank Accession AL937711 [GenBank]
Graphic View Graphic view of gene At5g61840
Predicted Position of Insertion Chr5:24842264 - go to primer design
BLAST e Value 2e-150
Hit Clone Code (BAC ID) MAC9
Hit Gene Code At5g61840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Exostosin family protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37