SimpleSearch - Line and FST details
Line specific information
| Line ID | 088G05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N408429) |
| Segregation Analysis | 50:49:39 |
| Confirmed for Hit | At5g10340 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At5g10340
| Sequence (A. th genome BLAST matches underlined) | >39-K016185-022-088-G05-8409 CGTGTCATGGCATGGGCTGACATGGATTCTNCTATAGCATCTTGCTTATAGTGAGANCGA CTTGCGCACGAAATACCGAGATGTCCCCATGGGCGACACTCACACCTCGCTCACACTCAG GACAGCCTATGGGATCCTCCCTATAGTGAGANNGCNCGCCCNNTCCCCCTATGGGATCCT CCCTATAGTGAG |
| GenBank Accession | AL937727 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:3253202 - go to primer design |
| BLAST e Value | 1e-28 |
| Hit Clone Code (BAC ID) | F12B17 |
| Hit Gene Code | At5g10340 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | F-box family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T22E19
| Sequence (A. th genome BLAST matches underlined) | >39-K016184-022-088-G05-8409 CTGACATGGATTCTCCTAGGATGATAGGAACTCGTCTGCTTACTTCTTGTTCTGTGAATA AGATTCATGATTATATTTGGGCTGAATCTTCTCAGAAATATCTGCGTATATTTTATGAGG GCATCCTCCACTGTATTATAGGTTTTTTGATGGTTGATTCACTTAGTGAAGAACCTTGTT GCTATGGGATCCTCCCNTTATAGTGAGANAACANGGNNGGNGTTCTCACTTCGTGTGCGC AGAAAAGATTAGGATATGTTTTTTGGTCCATGGTATCGTCCCTATAGCGAGAGGGGATCC TTACAATCTCGAGAGCTATGGGATCCTCTCTATAGGGAGAGTGCACNCGGCTTCTGACGA TCAGTGCAGCCGTCTTCTGAAAACGACATGTCGCACAAGTCCTAAATAACGCGACAGGCT GCCGCCCTGCCCTTTTCCTGGCGTTTTCTTGTCGCGGGTTTTAATCGCATTAAGTAGAAT ACTTGCGACTAAAACCGGAGACATTACGCCATGAACCAGAACGCCGCCGCTGGGCTGGTG GGCTATGCCCGCGTCAGCACCGGCGACCAGGGACTTGATCACCAAAGGGGCCGAACTGAC CCGGGCGGCTGCACAAAGCTGTTTCCGAGAAGATCACCGGCCCCAGGCGCGACCCGCCGG AACTGGCCCAGAATGCTGAACCCCTACGCCCTGGCGACGTTGTGGCAGTGACAGGC |
| GenBank Accession | AL937726 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:25640226 - go to primer design |
| BLAST e Value | 2e-24 |
| Hit Clone Code (BAC ID) | T22E19 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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