SimpleSearch - Line and FST details


Line specific information

 
Line ID 088G09
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 92877, 92878

Gene hit At5g12930

 
Sequence (A. th genome BLAST matches underlined) 
>71-K016185-022-088-G09-8409
ATGAAGCACTCACAATTGATATATCCCGGAGTACAGGTCACACAGCTCACTATGGTATTC
TCCTTATAGTGAGATGCTGCACNCATCANTATTCCTGAGTTCCCGATGAGAATGGATAGT
CTTCTTTCTGATATGGATGAAATTACAGCTCCTTCATCCTCTGATTCACAAGCTACTGCA
AACACACCCCATGGAGCTGTGCTGGAGGCTCCTGTTGATTCCGTGAAGGAGGAACCCGCA
ACTTTGGGACAAACCAATAAATCAACGCCAGCTAAATCCTCAACGTCACTTATGAAATCT
GTAAAGCCGCCTATCGATAACCTAGTCCATCCACTACTCGGAAGCCTGTTTCAGTTTCTT
CTTCTTCAAGGGTGAGACGGGGTTCCTCTACAGGTGATTCAAAGAAACCTATGGGATCCT
CCCTATAGTGAGAGAGAAAAAAAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGT
ATATGTCCGCCGCGTTATTATAACATGA
GenBank Accession AL937734 [GenBank]
Graphic View Graphic view of gene At5g12930
Predicted Position of Insertion Chr5:4083585 - go to primer design
BLAST e Value 9e-119
Hit Clone Code (BAC ID) T24H18
Hit Gene Code At5g12930 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation inactive rhomboid protein
Insertion Classification CDSi
Confirmation Status unknown
Primer and wt-amplicons show primer details

Gene hit At4g28630

 
Sequence (A. th genome BLAST matches underlined) 
>71-K016184-022-088-G09-8409
GATACATAATTCGATTAGATACACTAAACAGTAAATGCTAAAAATATTTGAGTAACACAT
CAGTTAGCTATGGGATCCTCCCTATAGTGAGACNTCANGTTTAATCAGAATCACTTTTGG
AGTGTAAAATGTCATCTGCATGTGATTTATGTAAAAATTGTGACTGAATAACAAAAAAGT
TTAGAATACCCTAAATAGATTTTTCCAATAAGCCCTAAGTAGATAACTAACATTTTACCT
AATTTGTCACGGTTTAGACTAATAACAACAAAATGTAAGAGAACGATTCTATGGGATCCT
CCCTATAGTGAGAGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATG
TAAATGTCCGCAGCGTTATTATA
GenBank Accession AL937733 [GenBank]
Graphic View Graphic view of gene At4g28630
Predicted Position of Insertion Chr4:14139040 - go to primer design
BLAST e Value 2e-98
Hit Clone Code (BAC ID) T5F17
Hit Gene Code At4g28630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ABC transporter of the mitochondrion 1
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37