SimpleSearch - Line and FST details
Line specific information
Line ID | 089F01 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N408509) |
Segregation Analysis | 100:88:84 |
Confirmed for Hit | At1g11430 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit F3H9
Sequence (A. th genome BLAST matches underlined) | >06-K016186-022-089-F01-8409 TGTAAGTTCCTCATGAATCCAGGAATGTTCAGGCCAAAATGAACATAATATAGAGAACTT GTTTTTACGAGAAAAAGTAGATGGGTTTCACTTGTTGTCTATGGGATCTTCCTTATAGTG AGAGNGANGGAAAGNATATTCACCCGATTTATTTCAAGATGTGCCTGACTACAACCACGA CTACAAGTTTACCAATGGATCTGCTTATCGAGCGCTTTTTTTCCTTCGTCTCCCCCCACG ACTCTCCACTTGCGCAAATGGATCTGGTGCACCACCACCGTCACACTGAGCCCGCTTCTC ACGTGACAGCCCATATAGCGCTACGACCGCTCCGTGCAGGCGCCCGCTCTCCCGGCCCCC CACTGTCGGTCCGCCACCTGATCCACTTTCTTTGGTATGCAACCAGGTCGACCCAAACCA CCGCCACTCGTGGACCACCCACACCCATGTGTGCCCCACGGCGGCTCCCCTCCCATCGGT CGTCCATCCCAACCCTACGGGGCGGGCCCAATAATTAACCCGAAACCCACCCCTGGCCAA CAATTGCGCACCACAGAACAGGAACACCACCCAGATCAGCCGCAGGGGTAAAAAACCGAG AGAGCACACAAATATCGGGGCACCGGACGGGGGGGGACCCAAACGGGCAACAATGGTAAG ATCGGGGCACACAGCGCCGGCCACCGAGTAGGCCACCCGTACACTGCCCCGCCTCCACCC CCGGATCCTTACATGTTTGGGACCACAAAACAGACACCGGA |
GenBank Accession | AL937850 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:9908369 - go to primer design |
BLAST e Value | 5e-37 |
Hit Clone Code (BAC ID) | F3H9 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Gene hit At1g11430
Sequence (A. th genome BLAST matches underlined) | >06-K016187-022-089-F01-8409 AATGAAGCCTTTACATTGAATATATATCCCATGTATATTTCTCTATATACTCCCATGCAG ATTTCCCTTACATATTTCCCTATGGGATCCTGCCTTATAATGAGATTACTGTGAGGTTAA GTTTATTAACAGGTTTTAGTTCGGGATTTGTTTTACTAAAAACATAGTTCAGGGTTTAAA AATGGATCTGACCAATGAGAGTTTTTTTTCATTAAATTCCCTATGGGATCCTCCCCTATA GTGAGAACAATGAGCATAGAGAGACGATTATGCTTCCTGGTTGCGATTACAATCATTGGC TCATTGTAATGGAGTTTCCTAAAGATCCAGCGCCAAATAAGGATCAGATAATTGATACTT ACCTTAACACTCTTGCTACTGATCTTGGCAGGTTCGATTTCGCTTTCTTATTGATTCTCT TCGTTGATGAATTAGTTAACTAATAGACGACATTTACTTGTGTTGCTAATGGACTTGTCC TTTGATTGAATCCCATGCTGCGGATAAAAAAATTTGGGTTTTTGTTAAATTAAAGGTTTT GATGATACTTTCGGGTAA |
GenBank Accession | AL937851 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:3847284 - go to primer design |
BLAST e Value | 1e-124 |
Hit Clone Code (BAC ID) | T23J18 |
Hit Gene Code | At1g11430 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | plastid developmental protein DAG |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |