SimpleSearch - Line and FST details


Line specific information

 
Line ID 089F03
Vector Used pAC161
Line Availability available as T3 set from NASC (N408511)
Segregation Analysis 50:46:37
Confirmed for Hit At5g07410
Parent of DUPLO pair none
Parent of pair(s) 95600, 95603, 95605, 95607

Gene hit At5g07410

 
Sequence (A. th genome BLAST matches underlined) 
>22-K016187-022-089-F03-8409
TTTCCCGGACTGAAGCCTTTACAATTGAATCACTTGAATCATTAACATACACATGTATAT
ATCTATAATATCCTCGATCCAGACAACATTCCCCTCAACTGAAATAGCTTAACCCTCATG
ATAATCGATCTTAGCAGATTCACAAATTTTTGTTGTAGAGAGTGATAGAGGAGAGAGAGA
GAGAGGTTGGTGAATGGTGATGATGGTGTTATGATGAGGGAATGATGAGTGGCGGAGACG
AATATGGGCTTTTAATAAGACACAACAGAAACAGGTCGTCATTCCTAAACCCTATGGGAT
CCTCCCTTATAGAGAGACACTATCNACAGGAACAAACCCTTCATTACATTGATGGGACAA
CCCAATGCCATGCCTGTTATCACCTACGACGGTACCGCCGCCAAGTATGGAACCGTTGAT
AGTGCCTCTCTCATTATCTTATCCGACTATTTCATGGCCGTTAACATCGTCGTTAAGGTA
AGTGATCCTACTAATATATTATACATATCTATGAGACTATGGGATCCTC
GenBank Accession AL937855 [GenBank]
Graphic View Graphic view of gene At5g07410
Predicted Position of Insertion Chr5:2345992 - go to primer design
BLAST e Value 1e-108
Hit Clone Code (BAC ID) T2I1
Hit Gene Code At5g07410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pectin lyase-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL937855 [GenBank]


Last Updated on 10.06.2021 13:37