SimpleSearch - Line and FST details


Line specific information

 
Line ID 090G02
Vector Used pAC161
Line Availability line died - no seeds available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 12246

Gene hit At1g12540

 
Sequence (A. th genome BLAST matches underlined) 
>15-011957-strizhov-G2-8409
TTTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACCTTGAATACTCAGTCTATAT
CGCCTCCATCACCTACCACTGTATGAAAAGAGCCGAGAATTTTAGATACTTTATCAGTGA
TCAGAGAGGATACTATGAGTGATCTCCCTCTTGCTTCTAGATCACATCGAGGATAGATTA
TAGATAATTACCTCACAAGCAGGGGCGTGTATGACATCCTTGGTGGACTCTATGGGATCC
TCCCTATAGTGGGTCGATNTACTCAAGAGCCTTTTAATATTCTTAAAATAGTTTTTTTTT
TTTTTTTTTTTTTCGCCAACGGGGAAAAAACATTGGGAATTTTGCCATTGGGTCCCCAAA
AATTTGGGGGGGCCCGGGGGGCCCCCCCTTTAGGGGGC
GenBank Accession FR802731 [GenBank]
Graphic View Graphic view of gene At1g12540
Predicted Position of Insertion Chr1:4273912 - go to primer design
BLAST e Value 1e-10
Hit Clone Code (BAC ID) F5O11
Hit Gene Code At1g12540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g16040

 
Sequence (A. th genome BLAST matches underlined) 
>15-K102104-0022-090-G02-8409
CATTTACATTGAATCAGAGTCAAAACACACAAGACCAAAATAATCCTATATGAGAAGAAA
CGATTTTTTTGAGCATTAAGAGTGTAAAGTGAGGATACTATGGGATCCTCCCTA
GenBank Accession FR802732 [GenBank]
Graphic View Graphic view of gene At1g16040
Predicted Position of Insertion Chr1:5505283 - go to primer design
BLAST e Value 1e-23
Hit Clone Code (BAC ID) T24D18
Hit Gene Code At1g16040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phosphatidylinositol-glycan biosynthesis class F-like protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37