SimpleSearch - Line and FST details


Line specific information

 
Line ID 090H04
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 12697
Note

Gene hit At1g20650

 
Sequence (A. th genome BLAST matches underlined) 
>32-011957-strizhov-H4-8409
NTGATCCATGTAGATTGTCCCGGACATAGAAGACTCTTACAATTGTCTATAGTCATTCGA
CCATATTAATATTTTGGACATGTCTGCATGCATGTAAACTCTATGGGATCCTCACCATAT
TGAGAGTGCTATATATTAAAGTAGTGTCTCTACCGTGATTTTTATTTTTTTCTATATACT
GTTTAAACCTCAGTTTTTTTGTTGTTGTTATAAGATCCTTGTCATTTTTTGTCGTGATTA
GATGTAATTTGTATAATTTTAGTAACTCTTCAGTTTTTTTTTGTTTTAAAAATATATTTT
CTCTCTCTCTGTCTTCCTGCAATCTATCGCCGGCCGATTCAATAATTTCGCTTTACTCTG
CCAAAAAAGTTTGTTCTTTTGTTTTCTGGGATTATCCAAAGAGAAGAAACAGAGGAAATC
AATCTCTTTTTTAGTTTCAGACCCTAAATCCTATGGGATCCTCCCTATAGTGAGCGTTTT
AC
GenBank Accession AL769672 [GenBank]
Graphic View Graphic view of gene At1g20650
Predicted Position of Insertion Chr1:7160565 - go to primer design
BLAST e Value 2e-129
Hit Clone Code (BAC ID) F5M15
Hit Gene Code At1g20650 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At4g10465

 
Sequence (A. th genome BLAST matches underlined) 
>32-K102103-0022-090-H04-8409
TCGGACAGAGCATTTACAATTGAATATATCATTGGTTTATAAATATTTTGGACATGTATG
CATGCATGTCGACTCTATGGGATCCTCCCTATAGTGAGACGTAT
GenBank Accession FR802738 [GenBank]
Graphic View Graphic view of gene At4g10465
Predicted Position of Insertion Chr4:6473919 - go to primer design
BLAST e Value 0.53
Hit Clone Code (BAC ID) F7L13
Hit Gene Code At4g10465 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Heavy metal transport/detoxification superfamily protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37